Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G264800.1 | Wheat | nucleus | 94.72 | 94.46 |
| TraesCS7D01G359900.1 | Wheat | nucleus | 94.17 | 94.43 |
| TraesCS7A01G363100.1 | Wheat | nucleus | 92.5 | 93.54 |
| Zm00001d046354_P001 | Maize | nucleus | 66.94 | 65.14 |
| Os06t0571800-02 | Rice | nucleus | 60.56 | 62.82 |
| EER88552 | Sorghum | nucleus | 66.39 | 61.92 |
| HORVU6Hr1G039720.2 | Barley | cytosol | 48.06 | 50.29 |
| GSMUA_Achr7P09030_001 | Banana | nucleus | 21.67 | 50.0 |
| GSMUA_Achr2P16730_001 | Banana | nucleus | 23.06 | 39.9 |
| VIT_04s0008g01290.t01 | Wine grape | plastid | 30.83 | 36.27 |
| VIT_11s0016g02210.t01 | Wine grape | nucleus, plastid | 30.0 | 34.95 |
| Bra035633.1-P | Field mustard | nucleus | 26.39 | 31.56 |
| Solyc07g038160.2.1 | Tomato | nucleus | 22.78 | 30.83 |
| PGSC0003DMT400011449 | Potato | nucleus | 23.06 | 29.02 |
| KRH19153 | Soybean | nucleus | 25.28 | 28.98 |
| KRH02716 | Soybean | nucleus | 25.83 | 28.88 |
| AT4G26150.1 | Thale cress | cytosol | 27.78 | 28.41 |
| PGSC0003DMT400000761 | Potato | nucleus | 22.22 | 27.87 |
| HORVU5Hr1G116310.1 | Barley | nucleus | 12.5 | 27.78 |
| CDY20709 | Canola | nucleus | 29.72 | 27.16 |
| CDY67979 | Canola | nucleus | 29.44 | 27.04 |
| CDX94365 | Canola | nucleus | 26.94 | 26.94 |
| CDX88593 | Canola | nucleus | 26.39 | 26.76 |
| KRH12382 | Soybean | nucleus | 23.33 | 26.67 |
| Solyc12g008830.1.1 | Tomato | nucleus | 21.67 | 26.62 |
| CDY32755 | Canola | nucleus | 28.61 | 26.61 |
| Bra002788.1-P | Field mustard | nucleus | 28.61 | 26.61 |
| CDY42753 | Canola | nucleus | 27.22 | 26.49 |
| CDY42752 | Canola | nucleus | 27.22 | 26.49 |
| CDY32891 | Canola | nucleus | 28.33 | 26.29 |
| AT5G56860.1 | Thale cress | nucleus | 28.89 | 26.13 |
| KRH61505 | Soybean | nucleus | 21.11 | 26.03 |
| Bra026461.1-P | Field mustard | nucleus | 25.83 | 25.83 |
| CDY67546 | Canola | nucleus | 26.94 | 25.8 |
| CDX89358 | Canola | nucleus | 25.56 | 25.56 |
| CDY65439 | Canola | nucleus | 26.94 | 25.26 |
| Bra006851.1-P | Field mustard | nucleus, plastid | 26.94 | 25.26 |
| Bra019118.1-P | Field mustard | nucleus | 27.22 | 25.26 |
| KRH37384 | Soybean | nucleus | 22.5 | 24.04 |
| KRH15535 | Soybean | nucleus | 20.28 | 23.86 |
| KRH05458 | Soybean | nucleus | 20.28 | 23.86 |
| HORVU6Hr1G093630.3 | Barley | mitochondrion | 8.33 | 22.39 |
| HORVU1Hr1G091450.3 | Barley | plastid | 11.67 | 19.35 |
| Bra001644.1-P | Field mustard | nucleus | 7.78 | 19.18 |
| HORVU3Hr1G059870.2 | Barley | cytosol, extracellular, nucleus | 11.67 | 18.1 |
| HORVU1Hr1G022710.3 | Barley | plastid | 10.56 | 17.59 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:HORVU7Hr1G086810 | EnsemblPlants:HORVU7Hr1G086810.1 |
| InterPro:IPR000679 | InterPro:IPR013088 | UniProt:M0UF38 | PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 |
| PANTHER:PTHR10071 | PANTHER:PTHR10071:SF287 | SMART:SM00401 | SUPFAM:SSF57716 | UniParc:UPI000294D096 | InterPro:Znf_GATA |
| InterPro:Znf_NHR/GATA | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:523657424..523659573
Molecular Weight (calculated)
38801.1 Da
IEP (calculated)
8.573
GRAVY (calculated)
-0.402
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTIYMSQLS TAFPLMEEDH HHQDHHQGHF QAFTLPKDPP ILFPFVISNS SPSENSSTLS YGSDQHLMQH HVMLDQPQHM IGGSSSVFST PFPTVESIRD
101: DMIERSYSYD PYDMEKLQAT SGSLKIGKWT APAPAAKMRI TRKTSDPGVK KPRKRAQAYE DHGHMGGMNQ ALGVIRTCSD CNTTKTPLWR SGPCGPKSLC
201: NACGIRQRKA RRAMMATGAA PATDVGAAKA AAAGEAAVTV HPPKVKKEKR AADVDRSLPF KKRCKVVQDH TATNSAASTT VEAAAEPPIV VTTTTTTTDA
301: APARDLVDTI GANWSKSPTA ATASCFRPPP APFAVSVPVQ DEITDAAMLL MTLSCELVRS
101: DMIERSYSYD PYDMEKLQAT SGSLKIGKWT APAPAAKMRI TRKTSDPGVK KPRKRAQAYE DHGHMGGMNQ ALGVIRTCSD CNTTKTPLWR SGPCGPKSLC
201: NACGIRQRKA RRAMMATGAA PATDVGAAKA AAAGEAAVTV HPPKVKKEKR AADVDRSLPF KKRCKVVQDH TATNSAASTT VEAAAEPPIV VTTTTTTTDA
301: APARDLVDTI GANWSKSPTA ATASCFRPPP APFAVSVPVQ DEITDAAMLL MTLSCELVRS
001: MDSNFHYSID LNEDQNHHEQ PFFYPLGSSS SLHHHHHHHH HQVPSNSSSS SSSISSLSSY LPFLINSQED QHVAYNNTYH ADHLHLSQPL KAKMFVANGG
101: SSACDHMVPK KETRLKLTIR KKDHEDQPHP LHQNPTKPDS DSDKWLMSPK MRLIKKTITN NKQLIDQTNN NNHKESDHYP LNHKTNFDED HHEDLNFKNV
201: LTRKTTAATT ENRYNTINEN GYSNNNGVIR VCSDCNTTKT PLWRSGPRGP KSLCNACGIR QRKARRAAMA AAAAAGDQEV AVAPRVQQLP LKKKLQNKKK
301: RSNGGEKYNH SPPMVAKAKK CKIKEEEEKE MEAETVAGDS EISKSTTSSN SSISSNKFCF DDLTIMLSKS SAYQQVFPQD EKEAAVLLMA LSYGMVHG
101: SSACDHMVPK KETRLKLTIR KKDHEDQPHP LHQNPTKPDS DSDKWLMSPK MRLIKKTITN NKQLIDQTNN NNHKESDHYP LNHKTNFDED HHEDLNFKNV
201: LTRKTTAATT ENRYNTINEN GYSNNNGVIR VCSDCNTTKT PLWRSGPRGP KSLCNACGIR QRKARRAAMA AAAAAGDQEV AVAPRVQQLP LKKKLQNKKK
301: RSNGGEKYNH SPPMVAKAKK CKIKEEEEKE MEAETVAGDS EISKSTTSSN SSISSNKFCF DDLTIMLSKS SAYQQVFPQD EKEAAVLLMA LSYGMVHG
Arabidopsis Description
GATA21GATA transcription factor 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.