Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G116310.1 | Barley | nucleus | 88.06 | 72.84 |
| EER93149 | Sorghum | nucleus | 59.7 | 50.96 |
| Zm00001d034751_P001 | Maize | nucleus | 58.96 | 48.47 |
| Solyc09g075610.2.1 | Tomato | plastid | 28.36 | 42.7 |
| TraesCS3A01G538400.1 | Wheat | nucleus | 47.01 | 37.5 |
| KRH68462 | Soybean | cytosol | 22.39 | 37.5 |
| TraesCS3D01G544000.1 | Wheat | nucleus | 50.0 | 37.43 |
| TraesCS3B01G603900.1 | Wheat | nucleus | 50.0 | 37.22 |
| PGSC0003DMT400081417 | Potato | nucleus | 27.61 | 34.91 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 32.09 | 34.68 |
| VIT_14s0060g01520.t01 | Wine grape | nucleus | 30.6 | 33.06 |
| CDX85400 | Canola | nucleus | 30.6 | 32.28 |
| Bra037421.1-P | Field mustard | nucleus | 29.1 | 30.71 |
| CDX86241 | Canola | nucleus | 29.1 | 30.71 |
| PGSC0003DMT400063771 | Potato | nucleus | 34.33 | 30.46 |
| Solyc01g100220.2.1 | Tomato | nucleus | 33.58 | 30.2 |
| VIT_05s0077g01450.t01 | Wine grape | nucleus | 33.58 | 29.41 |
| CDY05639 | Canola | nucleus | 28.36 | 29.01 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 30.6 | 28.87 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 32.09 | 28.86 |
| CDY33918 | Canola | nucleus | 29.85 | 28.37 |
| AT3G06740.1 | Thale cress | nucleus | 31.34 | 28.19 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 29.85 | 28.17 |
| CDX87024 | Canola | nucleus | 21.64 | 28.16 |
| KRH02314 | Soybean | nucleus | 29.1 | 27.86 |
| Bra020650.1-P | Field mustard | nucleus | 29.1 | 27.86 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 26.12 | 27.78 |
| KRG96744 | Soybean | cytosol, mitochondrion, nucleus | 17.16 | 27.71 |
| PGSC0003DMT400011779 | Potato | nucleus | 34.33 | 27.38 |
| Solyc12g099370.1.1 | Tomato | nucleus | 34.33 | 27.38 |
| Bra036600.1-P | Field mustard | nucleus | 20.9 | 27.18 |
| Bra040288.1-P | Field mustard | nucleus | 27.61 | 26.62 |
| CDY34933 | Canola | nucleus | 27.61 | 26.43 |
| CDY25008 | Canola | nucleus | 19.4 | 26.0 |
| AT5G49300.1 | Thale cress | cytosol | 26.87 | 25.9 |
| CDY34429 | Canola | cytosol | 29.1 | 25.49 |
| AT5G26930.1 | Thale cress | cytosol | 22.39 | 25.0 |
| KRH50773 | Soybean | nucleus | 29.1 | 24.68 |
| CDX90545 | Canola | nucleus | 26.87 | 24.49 |
| CDX82388 | Canola | nucleus | 31.34 | 24.14 |
| Bra012742.1-P | Field mustard | nucleus | 29.85 | 23.95 |
| Bra033533.1-P | Field mustard | nucleus | 31.34 | 23.46 |
| CDY32214 | Canola | nucleus | 31.34 | 23.46 |
| PGSC0003DMT400060241 | Potato | nucleus | 34.33 | 23.35 |
| CDX95897 | Canola | nucleus | 28.36 | 23.17 |
| Bra022184.1-P | Field mustard | nucleus | 28.36 | 22.89 |
| CDX92103 | Canola | nucleus | 28.36 | 22.89 |
| Solyc05g054400.2.1 | Tomato | nucleus | 33.58 | 22.84 |
| Bra009926.1-P | Field mustard | cytosol | 13.43 | 22.78 |
| CDY09717 | Canola | nucleus | 29.85 | 22.6 |
| CDX75893 | Canola | nucleus | 29.85 | 21.86 |
| AT4G16141.1 | Thale cress | cytosol | 32.09 | 21.83 |
| Bra021209.1-P | Field mustard | nucleus | 27.61 | 21.64 |
| CDY34981 | Canola | nucleus | 27.61 | 21.64 |
| CDY52723 | Canola | nucleus | 28.36 | 21.11 |
| AT3G16870.1 | Thale cress | nucleus | 29.85 | 21.05 |
| CDX80603 | Canola | nucleus | 21.64 | 19.73 |
| CDY68751 | Canola | cytosol, mitochondrion | 13.43 | 17.82 |
| HORVU1Hr1G022710.3 | Barley | plastid | 28.36 | 17.59 |
| HORVU3Hr1G059870.2 | Barley | cytosol, extracellular, nucleus | 15.67 | 9.05 |
| HORVU6Hr1G039720.2 | Barley | cytosol | 21.64 | 8.43 |
| HORVU7Hr1G086810.1 | Barley | nucleus | 22.39 | 8.33 |
| HORVU1Hr1G091450.3 | Barley | plastid | 13.43 | 8.29 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G093630.3 | EnsemblPlantsGene:HORVU6Hr1G093630 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 |
| PANTHER:PTHR10071 | PANTHER:PTHR10071:SF279 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000B47D8B6 | UniProt:A0A287V8Q2 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:579818588..579819080
Molecular Weight (calculated)
15044.5 Da
IEP (calculated)
11.760
GRAVY (calculated)
-0.710
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRARRRLIC FFSFPSIQSL CNACGIRYRK KRREALGLDE PPKKRQPAAA ASAAAAAACS KAGGESAEPD QQQQQPKKKT TTTKRGREVE LRVVGFGKEV
101: VLKQRRRMRR RRRLGEEEKA AILLMALSSG VIYG
101: VLKQRRRMRR RRRLGEEEKA AILLMALSSG VIYG
001: MLDPTEKVID SESMESKLTS VDAIEEHSSS SSNEAISNEK KSCAICGTSK TPLWRGGPAG PKSLCNACGI RNRKKRRTLI SNRSEDKKKK SHNRNPKFGD
101: SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
101: SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
Arabidopsis Description
GATA15GATA transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.