Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009926.1-P | Field mustard | cytosol | 78.22 | 100.0 |
| CDX87024 | Canola | nucleus | 63.37 | 62.14 |
| CDY25008 | Canola | nucleus | 60.4 | 61.0 |
| CDX80603 | Canola | nucleus | 84.16 | 57.82 |
| AT5G26930.1 | Thale cress | cytosol | 61.39 | 51.67 |
| CDX85400 | Canola | nucleus | 33.66 | 26.77 |
| CDY05639 | Canola | nucleus | 34.65 | 26.72 |
| KXG32453 | Sorghum | nucleus | 32.67 | 26.4 |
| CDX86241 | Canola | nucleus | 32.67 | 25.98 |
| CDY34933 | Canola | nucleus | 35.64 | 25.71 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 30.69 | 25.0 |
| CDY33918 | Canola | nucleus | 34.65 | 24.82 |
| Zm00001d037605_P001 | Maize | nucleus | 34.65 | 24.48 |
| Zm00001d009193_P001 | Maize | plastid | 33.66 | 24.46 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 29.7 | 23.81 |
| TraesCS1B01G126600.1 | Wheat | cytosol | 33.66 | 23.29 |
| Os01t0343300-01 | Rice | nucleus | 29.7 | 22.9 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 33.66 | 22.82 |
| TraesCS1D01G106100.1 | Wheat | cytosol | 32.67 | 22.6 |
| Os01t0976800-01 | Rice | nucleus | 31.68 | 22.54 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 31.68 | 22.54 |
| Solyc01g100220.2.1 | Tomato | nucleus | 32.67 | 22.15 |
| PGSC0003DMT400063771 | Potato | nucleus | 32.67 | 21.85 |
| KXG21349 | Sorghum | cytosol | 33.66 | 21.79 |
| Zm00001d040775_P001 | Maize | nucleus | 31.68 | 21.77 |
| CDX90545 | Canola | nucleus | 31.68 | 21.77 |
| CDY34429 | Canola | cytosol | 32.67 | 21.57 |
| TraesCS1A01G097300.1 | Wheat | cytosol | 32.67 | 20.75 |
| CDX95897 | Canola | nucleus | 33.66 | 20.73 |
| CDX82388 | Canola | nucleus | 35.64 | 20.69 |
| CDX92103 | Canola | nucleus | 33.66 | 20.48 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 28.71 | 20.42 |
| EER93149 | Sorghum | nucleus | 31.68 | 20.38 |
| Zm00001d034751_P001 | Maize | nucleus | 32.67 | 20.25 |
| CDY34981 | Canola | nucleus | 33.66 | 19.88 |
| HORVU5Hr1G116310.1 | Barley | nucleus | 31.68 | 19.75 |
| CDY32214 | Canola | nucleus | 34.65 | 19.55 |
| CDY52723 | Canola | nucleus | 34.65 | 19.44 |
| Os05t0155400-01 | Rice | mitochondrion, nucleus, vacuole | 36.63 | 19.17 |
| TraesCS5D01G508800.1 | Wheat | nucleus | 30.69 | 19.14 |
| CDX75893 | Canola | nucleus | 34.65 | 19.13 |
| TraesCS3A01G538400.1 | Wheat | nucleus | 31.68 | 19.05 |
| CDY09717 | Canola | nucleus | 32.67 | 18.64 |
| TraesCS5B01G508800.1 | Wheat | nucleus | 30.69 | 18.56 |
| TraesCS3D01G544000.1 | Wheat | nucleus | 31.68 | 17.88 |
| TraesCS3B01G603900.1 | Wheat | nucleus | 31.68 | 17.78 |
| TraesCS4A01G364700.1 | Wheat | nucleus | 30.69 | 17.13 |
| Zm00001d011771_P001 | Maize | nucleus | 32.67 | 16.92 |
| EES04307 | Sorghum | nucleus | 34.65 | 16.13 |
| HORVU1Hr1G022710.3 | Barley | plastid | 33.66 | 15.74 |
| CDY69687 | Canola | nucleus | 26.73 | 14.29 |
| CDY13040 | Canola | cytosol | 27.72 | 14.07 |
| CDY72649 | Canola | nucleus | 27.72 | 14.0 |
| CDY60289 | Canola | nucleus | 27.72 | 13.86 |
| HORVU6Hr1G093630.3 | Barley | mitochondrion | 17.82 | 13.43 |
| CDY53079 | Canola | cytosol | 26.73 | 13.04 |
| CDY51221 | Canola | nucleus | 25.74 | 12.94 |
| CDY30768 | Canola | nucleus | 28.71 | 12.72 |
| CDY45238 | Canola | nucleus | 28.71 | 12.29 |
| CDX69237 | Canola | nucleus | 26.73 | 12.11 |
| CDY70754 | Canola | nucleus | 26.73 | 12.11 |
| CDX72587 | Canola | cytosol | 26.73 | 11.89 |
| CDY24779 | Canola | nucleus | 24.75 | 11.74 |
| CDY68627 | Canola | nucleus | 25.74 | 11.71 |
| CDX77958 | Canola | nucleus | 26.73 | 10.15 |
| CDY28986 | Canola | cytosol | 26.73 | 9.85 |
| CDX90680 | Canola | nucleus | 26.73 | 9.71 |
| CDX73777 | Canola | nucleus | 26.73 | 9.31 |
| CDX88593 | Canola | nucleus | 32.67 | 9.3 |
| CDX89358 | Canola | nucleus | 32.67 | 9.17 |
| CDX94365 | Canola | nucleus | 32.67 | 9.17 |
| CDY42752 | Canola | nucleus | 32.67 | 8.92 |
| CDY42753 | Canola | nucleus | 32.67 | 8.92 |
| CDY32755 | Canola | nucleus | 33.66 | 8.79 |
| CDY67546 | Canola | nucleus | 32.67 | 8.78 |
| CDY32891 | Canola | nucleus | 33.66 | 8.76 |
| CDY67979 | Canola | nucleus | 32.67 | 8.42 |
| CDY20709 | Canola | nucleus | 32.67 | 8.38 |
| CDY65439 | Canola | nucleus | 31.68 | 8.33 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078JT08 | UniProt:A0A078JT08 | EnsemblPlants:CDY68751 | ProteinID:CDY68751 |
| ProteinID:CDY68751.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00077584001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF242 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0004EE4125 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
BnaAnng28230DBnaAnng28230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JT08]
Coordinates
chrLK037893:+:3258..5032
Molecular Weight (calculated)
11228.0 Da
IEP (calculated)
10.829
GRAVY (calculated)
-0.349
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MLYKNIQRFL ATVVSKGALI TKMEEEKKTV RCCSECKTTK TPMWRGGPSG PKSLCNACGI RLMKQRRSEL LGIRIIHSHK AYKKINSSPS SLSFSHGGVS
101: L
101: L
001: MDPRKLLSCS SSYVSVRMKE EKGTIRCCSE CKTTKTPMWR GGPTGPKSLC NACGIRHRKQ RRSELLGIHI IRSHKSLASK KINLLSSSHG GVAVKKRRSL
101: KEEEQAALCL LLLSCSSVLA
101: KEEEQAALCL LLLSCSSVLA
Arabidopsis Description
GATA23GATA transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC59]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.