Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039614.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 68.5 | 100.0 |
| CDY13040 | Canola | cytosol | 94.0 | 94.47 |
| CDY60289 | Canola | nucleus | 82.5 | 81.68 |
| CDY51221 | Canola | nucleus | 81.0 | 80.6 |
| AT2G18380.1 | Thale cress | cytosol | 80.5 | 77.4 |
| CDY69687 | Canola | nucleus | 45.5 | 48.15 |
| CDY24779 | Canola | nucleus | 47.5 | 44.6 |
| CDY68627 | Canola | nucleus | 48.5 | 43.69 |
| CDX69237 | Canola | nucleus | 48.5 | 43.5 |
| CDY70754 | Canola | nucleus | 48.0 | 43.05 |
| CDX72587 | Canola | cytosol | 48.5 | 42.73 |
| CDY53079 | Canola | cytosol | 44.0 | 42.51 |
| VIT_04s0023g01840.t01 | Wine grape | cytosol, plastid | 46.5 | 38.75 |
| PGSC0003DMT400040074 | Potato | nucleus | 45.0 | 36.29 |
| PGSC0003DMT400009031 | Potato | plastid | 42.5 | 34.41 |
| CDX77958 | Canola | nucleus | 45.5 | 34.21 |
| Solyc02g085190.1.1 | Tomato | plastid | 43.0 | 34.13 |
| CDY28986 | Canola | cytosol | 46.0 | 33.58 |
| Solyc02g062760.2.1 | Tomato | nucleus | 42.5 | 33.46 |
| CDY30768 | Canola | nucleus | 38.0 | 33.33 |
| CDX90680 | Canola | nucleus | 45.5 | 32.73 |
| GSMUA_Achr3P31070_001 | Banana | cytosol, nucleus, plastid | 34.0 | 32.23 |
| CDX73777 | Canola | nucleus | 46.5 | 32.07 |
| CDY45238 | Canola | nucleus | 37.5 | 31.78 |
| GSMUA_Achr6P27250_001 | Banana | cytosol, extracellular, nucleus | 35.5 | 30.6 |
| KRH43324 | Soybean | nucleus | 20.5 | 30.15 |
| GSMUA_Achr7P25620_001 | Banana | nucleus | 35.0 | 30.04 |
| TraesCS3D01G241100.1 | Wheat | cytosol, extracellular, nucleus | 34.0 | 29.57 |
| TraesCS3B01G269000.1 | Wheat | cytosol, extracellular, nucleus | 33.0 | 29.46 |
| HORVU3Hr1G059870.2 | Barley | cytosol, extracellular, nucleus | 34.0 | 29.31 |
| TraesCS3A01G240800.1 | Wheat | cytosol, extracellular, nucleus | 34.0 | 29.06 |
| Zm00001d043969_P001 | Maize | endoplasmic reticulum | 33.5 | 28.76 |
| Zm00001d009604_P001 | Maize | cytosol, nucleus, plastid | 29.0 | 28.57 |
| CDY68751 | Canola | cytosol, mitochondrion | 14.0 | 27.72 |
| Os01t0662800-00 | Rice | cytosol, extracellular, nucleus | 33.0 | 27.27 |
| KXG33047 | Sorghum | extracellular | 33.0 | 27.05 |
| CDY25008 | Canola | nucleus | 13.5 | 27.0 |
| EES19963 | Sorghum | mitochondrion, nucleus, vacuole | 30.5 | 26.64 |
| CDX87024 | Canola | nucleus | 13.5 | 26.21 |
| Os05t0567900-00 | Rice | cytosol, extracellular, plastid | 32.5 | 26.0 |
| CDY05639 | Canola | nucleus | 15.5 | 23.66 |
| CDX85400 | Canola | nucleus | 15.0 | 23.62 |
| CDX86241 | Canola | nucleus | 14.5 | 22.83 |
| CDY33918 | Canola | nucleus | 15.5 | 21.99 |
| CDY34429 | Canola | cytosol | 16.5 | 21.57 |
| CDY34933 | Canola | nucleus | 15.0 | 21.43 |
| CDX95897 | Canola | nucleus | 17.0 | 20.73 |
| CDX92103 | Canola | nucleus | 17.0 | 20.48 |
| CDX90545 | Canola | nucleus | 15.0 | 20.41 |
| CDY09717 | Canola | nucleus | 16.5 | 18.64 |
| CDY32214 | Canola | nucleus | 16.5 | 18.44 |
| CDY34981 | Canola | nucleus | 15.5 | 18.13 |
| CDX75893 | Canola | nucleus | 16.5 | 18.03 |
| CDX82388 | Canola | nucleus | 15.5 | 17.82 |
| CDY52723 | Canola | nucleus | 16.0 | 17.78 |
| CDX80603 | Canola | nucleus | 13.0 | 17.69 |
| CDX88593 | Canola | nucleus | 20.5 | 11.55 |
| CDY42753 | Canola | nucleus | 20.0 | 10.81 |
| CDY42752 | Canola | nucleus | 20.0 | 10.81 |
| CDY67979 | Canola | nucleus | 21.0 | 10.71 |
| CDY20709 | Canola | nucleus | 21.0 | 10.66 |
| CDY32755 | Canola | nucleus | 20.5 | 10.59 |
| CDY32891 | Canola | nucleus | 20.5 | 10.57 |
| CDY67546 | Canola | nucleus | 19.5 | 10.37 |
| CDY65439 | Canola | nucleus | 19.5 | 10.16 |
| CDX94365 | Canola | nucleus | 18.0 | 10.0 |
| CDX89358 | Canola | nucleus | 16.5 | 9.17 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078K147 | UniProt:A0A078K147 | EnsemblPlants:CDY72649 | ProteinID:CDY72649 |
| ProteinID:CDY72649.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00034196001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF305 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0004EE85CC | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
BnaA07g36170DBnaA07g36170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K147]
Coordinates
chrLK052425:-:59..1277
Molecular Weight (calculated)
22115.1 Da
IEP (calculated)
8.210
GRAVY (calculated)
-0.890
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGYQTNPNF SMFFSLENND QNNQDYNSYN SLSSSTSVDC TLSLGTPSTR LDDHRRYSSV SSNMSGDYFY HGGSAKTTSY KKGGGDHNLP RRCASCDTTS
101: TPLWRNGPKG PKSLCNACGI RFKKEERRAA ARNSITSVGG SSAAEIPAGG NYYNHHHHYP SSSPSWAHQN TQRVQYFSPA PEMEYPFVDD ATAASFLSWN
101: TPLWRNGPKG PKSLCNACGI RFKKEERRAA ARNSITSVGG SSAAEIPAGG NYYNHHHHYP SSSPSWAHQN TQRVQYFSPA PEMEYPFVDD ATAASFLSWN
001: MMGYQTNSNF SMFFSSENDD QNHHNYDPYN NFSSSTSVDC TLSLGTPSTR LDDHHRFSSA NSNNISGDFY IHGGNAKTSS YKKGGVAHSL PRRCASCDTT
101: STPLWRNGPK GPKSLCNACG IRFKKEERRA TARNLTISGG GSSAAEVPVE NSYNGGGNYY SHHHHHYASS SPSWAHQNTQ RVPYFSPVPE MEYPYVDNVT
201: ASSFMSWN
101: STPLWRNGPK GPKSLCNACG IRFKKEERRA TARNLTISGG GSSAAEVPVE NSYNGGGNYY SHHHHHYASS SPSWAHQNTQ RVPYFSPVPE MEYPYVDNVT
201: ASSFMSWN
Arabidopsis Description
GATA20HANL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.