Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039614.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 65.83 | 95.62 |
| CDY72649 | Canola | nucleus | 94.47 | 94.0 |
| CDY60289 | Canola | nucleus | 83.42 | 82.18 |
| CDY51221 | Canola | nucleus | 81.91 | 81.09 |
| AT2G18380.1 | Thale cress | cytosol | 82.41 | 78.85 |
| CDY69687 | Canola | nucleus | 45.23 | 47.62 |
| CDY24779 | Canola | nucleus | 48.24 | 45.07 |
| CDY53079 | Canola | cytosol | 44.72 | 43.0 |
| CDY68627 | Canola | nucleus | 47.74 | 42.79 |
| CDY70754 | Canola | nucleus | 47.74 | 42.6 |
| CDX69237 | Canola | nucleus | 47.74 | 42.6 |
| CDX72587 | Canola | cytosol | 48.24 | 42.29 |
| VIT_04s0023g01840.t01 | Wine grape | cytosol, plastid | 46.73 | 38.75 |
| PGSC0003DMT400040074 | Potato | nucleus | 44.72 | 35.89 |
| PGSC0003DMT400009031 | Potato | plastid | 42.71 | 34.41 |
| CDX77958 | Canola | nucleus | 45.73 | 34.21 |
| Solyc02g085190.1.1 | Tomato | plastid | 43.22 | 34.13 |
| Solyc02g062760.2.1 | Tomato | nucleus | 42.71 | 33.46 |
| CDY28986 | Canola | cytosol | 45.23 | 32.85 |
| CDY30768 | Canola | nucleus | 37.19 | 32.46 |
| GSMUA_Achr3P31070_001 | Banana | cytosol, nucleus, plastid | 34.17 | 32.23 |
| CDX90680 | Canola | nucleus | 44.72 | 32.01 |
| CDX73777 | Canola | nucleus | 46.23 | 31.72 |
| CDY45238 | Canola | nucleus | 37.19 | 31.36 |
| GSMUA_Achr6P27250_001 | Banana | cytosol, extracellular, nucleus | 35.68 | 30.6 |
| GSMUA_Achr7P25620_001 | Banana | nucleus | 35.18 | 30.04 |
| TraesCS3D01G241100.1 | Wheat | cytosol, extracellular, nucleus | 34.17 | 29.57 |
| TraesCS3B01G269000.1 | Wheat | cytosol, extracellular, nucleus | 33.17 | 29.46 |
| HORVU3Hr1G059870.2 | Barley | cytosol, extracellular, nucleus | 34.17 | 29.31 |
| TraesCS3A01G240800.1 | Wheat | cytosol, extracellular, nucleus | 34.17 | 29.06 |
| Zm00001d043969_P001 | Maize | endoplasmic reticulum | 33.67 | 28.76 |
| KRH43324 | Soybean | nucleus | 19.6 | 28.68 |
| Zm00001d009604_P001 | Maize | cytosol, nucleus, plastid | 29.15 | 28.57 |
| CDY68751 | Canola | cytosol, mitochondrion | 14.07 | 27.72 |
| KXG33047 | Sorghum | extracellular | 33.67 | 27.46 |
| Os01t0662800-00 | Rice | cytosol, extracellular, nucleus | 33.17 | 27.27 |
| CDY25008 | Canola | nucleus | 13.57 | 27.0 |
| EES19963 | Sorghum | mitochondrion, nucleus, vacuole | 30.65 | 26.64 |
| CDX87024 | Canola | nucleus | 13.57 | 26.21 |
| Os05t0567900-00 | Rice | cytosol, extracellular, plastid | 32.66 | 26.0 |
| CDY05639 | Canola | nucleus | 15.58 | 23.66 |
| CDX85400 | Canola | nucleus | 15.08 | 23.62 |
| CDX86241 | Canola | nucleus | 14.57 | 22.83 |
| CDY34933 | Canola | nucleus | 15.58 | 22.14 |
| CDY33918 | Canola | nucleus | 15.58 | 21.99 |
| CDY34429 | Canola | cytosol | 16.58 | 21.57 |
| CDX95897 | Canola | nucleus | 17.09 | 20.73 |
| CDX92103 | Canola | nucleus | 17.09 | 20.48 |
| CDX90545 | Canola | nucleus | 15.08 | 20.41 |
| CDY09717 | Canola | nucleus | 16.58 | 18.64 |
| CDY32214 | Canola | nucleus | 16.58 | 18.44 |
| CDY34981 | Canola | nucleus | 15.58 | 18.13 |
| CDX75893 | Canola | nucleus | 16.58 | 18.03 |
| CDX82388 | Canola | nucleus | 15.58 | 17.82 |
| CDY52723 | Canola | nucleus | 16.08 | 17.78 |
| CDX80603 | Canola | nucleus | 13.07 | 17.69 |
| CDX88593 | Canola | nucleus | 21.11 | 11.83 |
| CDY42753 | Canola | nucleus | 21.11 | 11.35 |
| CDY42752 | Canola | nucleus | 21.11 | 11.35 |
| CDY67979 | Canola | nucleus | 21.61 | 10.97 |
| CDY20709 | Canola | nucleus | 21.61 | 10.91 |
| CDY67546 | Canola | nucleus | 20.6 | 10.9 |
| CDY32755 | Canola | nucleus | 21.11 | 10.85 |
| CDY32891 | Canola | nucleus | 21.11 | 10.82 |
| CDX94365 | Canola | nucleus | 19.1 | 10.56 |
| CDY65439 | Canola | nucleus | 20.1 | 10.42 |
| CDX89358 | Canola | nucleus | 18.09 | 10.0 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078FFA3 | UniProt:A0A078FFA3 | EnsemblPlants:CDY13040 | ProteinID:CDY13040 |
| ProteinID:CDY13040.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00070846001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF305 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0004EBFD53 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
BnaC07g03390DBnaC07g03390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFA3]
Coordinates
chrLK032030:+:785617..786876
Molecular Weight (calculated)
21881.7 Da
IEP (calculated)
7.532
GRAVY (calculated)
-0.923
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGYQTNSNF SMFFSLENDD QNNQDYDSYN NPSSSTSVDC TLSLGTPSTR LDDHRRYSSA SSNMTGDYFY HGGSAKTTSY KKGGGDHNLP RRCATCDTTS
101: TPLWRNGPKG PKSLCNACGI RFKKEERRAA ARNSITSGGG SSAAEIPAGG NYYNHHHYAS SSPSWAHPNT QRVQYFSPAP EMEYPFVDDA TAASFLSWN
101: TPLWRNGPKG PKSLCNACGI RFKKEERRAA ARNSITSGGG SSAAEIPAGG NYYNHHHYAS SSPSWAHPNT QRVQYFSPAP EMEYPFVDDA TAASFLSWN
001: MMGYQTNSNF SMFFSSENDD QNHHNYDPYN NFSSSTSVDC TLSLGTPSTR LDDHHRFSSA NSNNISGDFY IHGGNAKTSS YKKGGVAHSL PRRCASCDTT
101: STPLWRNGPK GPKSLCNACG IRFKKEERRA TARNLTISGG GSSAAEVPVE NSYNGGGNYY SHHHHHYASS SPSWAHQNTQ RVPYFSPVPE MEYPYVDNVT
201: ASSFMSWN
101: STPLWRNGPK GPKSLCNACG IRFKKEERRA TARNLTISGG GSSAAEVPVE NSYNGGGNYY SHHHHHYASS SPSWAHQNTQ RVPYFSPVPE MEYPYVDNVT
201: ASSFMSWN
Arabidopsis Description
GATA20HANL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.