Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24779 | Canola | nucleus | 91.3 | 88.73 |
| AT4G36620.1 | Thale cress | cytosol | 79.71 | 78.2 |
| CDY69687 | Canola | nucleus | 68.6 | 75.13 |
| CDX72587 | Canola | cytosol | 80.68 | 73.57 |
| CDY70754 | Canola | nucleus | 79.23 | 73.54 |
| CDX69237 | Canola | nucleus | 78.26 | 72.65 |
| CDY68627 | Canola | nucleus | 77.78 | 72.52 |
| CDY60289 | Canola | nucleus | 44.44 | 45.54 |
| CDY51221 | Canola | nucleus | 43.48 | 44.78 |
| CDY13040 | Canola | cytosol | 43.0 | 44.72 |
| CDY72649 | Canola | nucleus | 42.51 | 44.0 |
| PGSC0003DMT400009031 | Potato | plastid | 48.31 | 40.49 |
| CDX77958 | Canola | nucleus | 50.72 | 39.47 |
| Solyc02g085190.1.1 | Tomato | plastid | 47.83 | 39.29 |
| CDY28986 | Canola | cytosol | 51.69 | 39.05 |
| CDX90680 | Canola | nucleus | 51.69 | 38.49 |
| VIT_04s0023g01840.t01 | Wine grape | cytosol, plastid | 43.96 | 37.92 |
| CDX73777 | Canola | nucleus | 52.17 | 37.24 |
| CDY45238 | Canola | nucleus | 40.58 | 35.59 |
| CDY30768 | Canola | nucleus | 36.72 | 33.33 |
| PGSC0003DMT400040074 | Potato | nucleus | 39.13 | 32.66 |
| GSMUA_Achr6P27250_001 | Banana | cytosol, extracellular, nucleus | 36.23 | 32.33 |
| Solyc02g062760.2.1 | Tomato | nucleus | 39.61 | 32.28 |
| Zm00001d009604_P001 | Maize | cytosol, nucleus, plastid | 30.92 | 31.53 |
| GSMUA_Achr7P25620_001 | Banana | nucleus | 34.3 | 30.47 |
| CDY25008 | Canola | nucleus | 14.49 | 30.0 |
| TraesCS3B01G269000.1 | Wheat | cytosol, extracellular, nucleus | 31.88 | 29.46 |
| Zm00001d043969_P001 | Maize | endoplasmic reticulum | 32.85 | 29.18 |
| TraesCS3D01G241100.1 | Wheat | cytosol, extracellular, nucleus | 32.37 | 29.13 |
| CDX87024 | Canola | nucleus | 14.49 | 29.13 |
| GSMUA_Achr3P31070_001 | Banana | cytosol, nucleus, plastid | 29.47 | 28.91 |
| HORVU3Hr1G059870.2 | Barley | cytosol, extracellular, nucleus | 32.37 | 28.88 |
| Os05t0567900-00 | Rice | cytosol, extracellular, plastid | 34.78 | 28.8 |
| TraesCS3A01G240800.1 | Wheat | cytosol, extracellular, nucleus | 32.37 | 28.63 |
| EES19963 | Sorghum | mitochondrion, nucleus, vacuole | 30.92 | 27.95 |
| KRH43324 | Soybean | nucleus | 18.36 | 27.94 |
| KXG33047 | Sorghum | extracellular | 32.37 | 27.46 |
| Os01t0662800-00 | Rice | cytosol, extracellular, nucleus | 31.88 | 27.27 |
| CDY68751 | Canola | cytosol, mitochondrion | 13.04 | 26.73 |
| CDX85400 | Canola | nucleus | 15.46 | 25.2 |
| CDX86241 | Canola | nucleus | 15.46 | 25.2 |
| CDY05639 | Canola | nucleus | 15.94 | 25.19 |
| CDY33918 | Canola | nucleus | 15.46 | 22.7 |
| CDY34933 | Canola | nucleus | 14.98 | 22.14 |
| CDX95897 | Canola | nucleus | 16.91 | 21.34 |
| CDX92103 | Canola | nucleus | 16.91 | 21.08 |
| CDY34429 | Canola | cytosol | 15.46 | 20.91 |
| CDX90545 | Canola | nucleus | 14.01 | 19.73 |
| CDX75893 | Canola | nucleus | 15.94 | 18.03 |
| CDY32214 | Canola | nucleus | 15.46 | 17.88 |
| CDX80603 | Canola | nucleus | 12.56 | 17.69 |
| CDY34981 | Canola | nucleus | 14.49 | 17.54 |
| CDY09717 | Canola | nucleus | 14.98 | 17.51 |
| CDX82388 | Canola | nucleus | 14.49 | 17.24 |
| CDY52723 | Canola | nucleus | 14.98 | 17.22 |
| CDX88593 | Canola | nucleus | 22.22 | 12.96 |
| CDY42753 | Canola | nucleus | 22.22 | 12.43 |
| CDY42752 | Canola | nucleus | 22.22 | 12.43 |
| CDY65439 | Canola | nucleus | 22.22 | 11.98 |
| CDY67546 | Canola | nucleus | 21.74 | 11.97 |
| CDY67979 | Canola | nucleus | 21.74 | 11.48 |
| CDY20709 | Canola | nucleus | 21.74 | 11.42 |
| CDY32755 | Canola | nucleus | 20.77 | 11.11 |
| CDY32891 | Canola | nucleus | 20.29 | 10.82 |
| CDX94365 | Canola | nucleus | 18.36 | 10.56 |
| CDX89358 | Canola | nucleus | 17.87 | 10.28 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078IUI1 | UniProt:A0A078IUI1 | EnsemblPlants:CDY53079 | ProteinID:CDY53079 |
| ProteinID:CDY53079.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00008510001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF305 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0004EE2863 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
BnaC03g76690DBnaC03g76690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUI1]
Coordinates
chrLK033162:-:47815..48601
Molecular Weight (calculated)
23165.5 Da
IEP (calculated)
7.858
GRAVY (calculated)
-0.767
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSMFFSEN DVVHHSSPYA SVDCTLSLGT PSTRLCNDDN DRRFSSHTSN RLCWDFLHGA KKGSGGDNSY LLPRRCANCE TTSTPLWRNG PRGPKSLCNA
101: CGIRFKKEER RASTVGISTS RGGSTAAGVS TSDHHGGANY YNNNHYVSPS PWIHHQQHKV PYYSPENNEY SFVDDVREVN HDATANPFLS WRLNVTDRTS
201: LVHDFTM
101: CGIRFKKEER RASTVGISTS RGGSTAAGVS TSDHHGGANY YNNNHYVSPS PWIHHQQHKV PYYSPENNEY SFVDDVREVN HDATANPFLS WRLNVTDRTS
201: LVHDFTM
001: MGFSMFFSPE NDVSHHSSPY ASVDCTLSLG TPSTRLCNED DERRFSSHTS DTIGWDFLNG SKKGGGGGGH NLLARRCANC DTTSTPLWRN GPRGPKSLCN
101: ACGIRFKKEE RRASTARNST SGGGSTAAGV PTLDHQASAN YYYNNNNQYA SSSPWHHQHN TQRVPYYSPA NNEYSYVDDV RVVDHDVTTD PFLSWRLNVA
201: DRTGLVHDFT M
101: ACGIRFKKEE RRASTARNST SGGGSTAAGV PTLDHQASAN YYYNNNNQYA SSSPWHHQHN TQRVPYYSPA NNEYSYVDDV RVVDHDVTTD PFLSWRLNVA
201: DRTGLVHDFT M
Arabidopsis Description
GATA19Uncharacterized protein At4g36620 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVL8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.