Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021209.1-P | Field mustard | nucleus | 97.08 | 97.08 |
| CDY52723 | Canola | nucleus | 95.91 | 91.11 |
| CDX95897 | Canola | nucleus | 77.78 | 81.1 |
| CDX92103 | Canola | nucleus | 77.78 | 80.12 |
| CDX82388 | Canola | nucleus | 75.44 | 74.14 |
| CDX75893 | Canola | nucleus | 77.19 | 72.13 |
| CDX90545 | Canola | nucleus | 61.4 | 71.43 |
| CDY34429 | Canola | cytosol | 63.16 | 70.59 |
| AT3G16870.1 | Thale cress | nucleus | 78.36 | 70.53 |
| CDY09717 | Canola | nucleus | 66.08 | 63.84 |
| CDY32214 | Canola | nucleus | 63.16 | 60.34 |
| CDX85400 | Canola | nucleus | 39.18 | 52.76 |
| CDY05639 | Canola | nucleus | 40.35 | 52.67 |
| CDX86241 | Canola | nucleus | 38.01 | 51.18 |
| CDY33918 | Canola | nucleus | 40.35 | 48.94 |
| CDX87024 | Canola | nucleus | 28.66 | 47.57 |
| CDY25008 | Canola | nucleus | 26.9 | 46.0 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 31.58 | 43.55 |
| CDY34933 | Canola | nucleus | 34.5 | 42.14 |
| PGSC0003DMT400011779 | Potato | nucleus | 40.94 | 41.67 |
| Solyc12g099370.1.1 | Tomato | nucleus | 40.94 | 41.67 |
| Solyc05g054400.2.1 | Tomato | nucleus | 42.69 | 37.06 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 32.16 | 36.91 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 30.41 | 36.62 |
| Os01t0976800-01 | Rice | nucleus | 30.41 | 36.62 |
| PGSC0003DMT400060241 | Potato | nucleus | 41.52 | 36.04 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 29.24 | 35.21 |
| EER93149 | Sorghum | nucleus | 31.58 | 34.39 |
| Zm00001d037605_P001 | Maize | nucleus | 28.66 | 34.27 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 25.15 | 34.13 |
| CDY68751 | Canola | cytosol, mitochondrion | 19.88 | 33.66 |
| Os01t0343300-01 | Rice | nucleus | 25.73 | 33.59 |
| TraesCS3A01G538400.1 | Wheat | nucleus | 32.75 | 33.33 |
| Zm00001d034751_P001 | Maize | nucleus | 31.58 | 33.13 |
| KXG32453 | Sorghum | nucleus | 23.98 | 32.8 |
| TraesCS5D01G508800.1 | Wheat | nucleus | 30.99 | 32.72 |
| HORVU5Hr1G116310.1 | Barley | nucleus | 30.41 | 32.1 |
| TraesCS3B01G603900.1 | Wheat | nucleus | 33.33 | 31.67 |
| CDX80603 | Canola | nucleus | 26.9 | 31.29 |
| TraesCS3D01G544000.1 | Wheat | nucleus | 32.75 | 31.28 |
| TraesCS5B01G508800.1 | Wheat | nucleus | 30.41 | 31.14 |
| Zm00001d009193_P001 | Maize | plastid | 24.56 | 30.22 |
| KXG21349 | Sorghum | cytosol | 27.49 | 30.13 |
| TraesCS1D01G106100.1 | Wheat | cytosol | 25.15 | 29.45 |
| TraesCS1B01G126600.1 | Wheat | cytosol | 24.56 | 28.77 |
| Zm00001d011771_P001 | Maize | nucleus | 32.16 | 28.21 |
| Zm00001d040775_P001 | Maize | nucleus | 23.98 | 27.89 |
| HORVU6Hr1G093630.3 | Barley | mitochondrion | 21.64 | 27.61 |
| EES04307 | Sorghum | nucleus | 34.5 | 27.19 |
| TraesCS1A01G097300.1 | Wheat | cytosol | 25.15 | 27.04 |
| TraesCS4A01G364700.1 | Wheat | nucleus | 28.07 | 26.52 |
| Os05t0155400-01 | Rice | mitochondrion, nucleus, vacuole | 28.07 | 24.87 |
| HORVU1Hr1G022710.3 | Barley | plastid | 25.15 | 19.91 |
| CDY60289 | Canola | nucleus | 18.71 | 15.84 |
| CDY13040 | Canola | cytosol | 18.13 | 15.58 |
| CDY72649 | Canola | nucleus | 18.13 | 15.5 |
| CDY51221 | Canola | nucleus | 18.13 | 15.42 |
| CDY53079 | Canola | cytosol | 17.54 | 14.49 |
| CDX89358 | Canola | nucleus | 29.82 | 14.17 |
| CDX94365 | Canola | nucleus | 29.82 | 14.17 |
| CDY69687 | Canola | nucleus | 15.2 | 13.76 |
| CDX88593 | Canola | nucleus | 28.07 | 13.52 |
| CDY68627 | Canola | nucleus | 17.54 | 13.51 |
| CDY70754 | Canola | nucleus | 17.54 | 13.45 |
| CDX69237 | Canola | nucleus | 17.54 | 13.45 |
| CDX72587 | Canola | cytosol | 17.54 | 13.22 |
| CDY24779 | Canola | nucleus | 16.37 | 13.15 |
| CDY45238 | Canola | nucleus | 18.13 | 13.14 |
| CDY42752 | Canola | nucleus | 28.07 | 12.97 |
| CDY42753 | Canola | nucleus | 28.07 | 12.97 |
| CDY67546 | Canola | nucleus | 28.07 | 12.77 |
| CDY32755 | Canola | nucleus | 28.07 | 12.4 |
| CDY32891 | Canola | nucleus | 28.07 | 12.37 |
| CDY30768 | Canola | nucleus | 16.37 | 12.28 |
| CDY65439 | Canola | nucleus | 27.49 | 12.24 |
| CDY67979 | Canola | nucleus | 26.9 | 11.73 |
| CDX77958 | Canola | nucleus | 18.13 | 11.65 |
| CDY20709 | Canola | nucleus | 26.32 | 11.42 |
| CDY28986 | Canola | cytosol | 18.13 | 11.31 |
| CDX73777 | Canola | nucleus | 18.71 | 11.03 |
| CDX90680 | Canola | nucleus | 17.54 | 10.79 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078HB79 | UniProt:A0A078HB79 | EnsemblPlants:CDY34981 | ProteinID:CDY34981 |
| ProteinID:CDY34981.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00057568001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF242 | SMART:SM00401 | SUPFAM:SSF57716 |
| UniParc:UPI0004EEBC1C | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : | : |
Description
BnaA01g27530DBnaA01g27530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HB79]
Coordinates
chrLK032344:-:172535..173148
Molecular Weight (calculated)
18436.8 Da
IEP (calculated)
8.954
GRAVY (calculated)
-0.746
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEGSEETKT KVDSAGELSD VDNENCSSSG SGGGETKKTC VDCGTFKTPL WRGGPAGPKS LCNDCGIKSR KKRQAALGIK PEKKIRKSNS CDSDLSLEDD
101: RNVNNKIKKA DDHTSTSSSC SKRVSKFLDL GLEVPVMKRS AVEKKRLWKK LGEEERAAVL LMALSCGSVY A
101: RNVNNKIKKA DDHTSTSSSC SKRVSKFLDL GLEVPVMKRS AVEKKRLWKK LGEEERAAVL LMALSCGSVY A
001: MSEGSEDTKT KLDSAGELSD VDNENCSSSG SGGGSSSGDT KRTCVDCGTI RTPLWRGGPA GPKSLCNACG IKSRKKRQAA LGMRSEEKKK NRKSNCNNDL
101: NLDHRNAKKY KINIVDDGKI DIDDDPKICN NKRSSSSSSN KGVSKFLDLG FKVPVMKRSA VEKKRLWRKL GEEERAAVLL MALSCSSVYA
101: NLDHRNAKKY KINIVDDGKI DIDDDPKICN NKRSSSSSSN KGVSKFLDLG FKVPVMKRSA VEKKRLWRKL GEEERAAVLL MALSCSSVYA
Arabidopsis Description
GATA17Uncharacterized protein At3g16870 [Source:UniProtKB/TrEMBL;Acc:Q0WPA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.