Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017766.1-P | Field mustard | nucleus | 99.47 | 99.47 |
| CDX72587 | Canola | cytosol | 96.83 | 80.62 |
| CDY70754 | Canola | nucleus | 85.71 | 72.65 |
| CDX69237 | Canola | nucleus | 84.66 | 71.75 |
| CDY68627 | Canola | nucleus | 84.13 | 71.62 |
| CDY24779 | Canola | nucleus | 78.84 | 69.95 |
| CDY53079 | Canola | cytosol | 75.13 | 68.6 |
| CDY72649 | Canola | nucleus | 48.15 | 45.5 |
| CDY13040 | Canola | cytosol | 47.62 | 45.23 |
| CDY60289 | Canola | nucleus | 48.15 | 45.05 |
| CDY51221 | Canola | nucleus | 47.62 | 44.78 |
| VIT_04s0023g01840.t01 | Wine grape | cytosol, plastid | 44.97 | 35.42 |
| CDY28986 | Canola | cytosol | 51.32 | 35.4 |
| CDX77958 | Canola | nucleus | 49.21 | 34.96 |
| CDX90680 | Canola | nucleus | 51.32 | 34.89 |
| PGSC0003DMT400009031 | Potato | plastid | 45.5 | 34.82 |
| CDX73777 | Canola | nucleus | 52.38 | 34.14 |
| Solyc02g085190.1.1 | Tomato | plastid | 45.5 | 34.13 |
| PGSC0003DMT400040074 | Potato | nucleus | 41.27 | 31.45 |
| Solyc02g062760.2.1 | Tomato | nucleus | 40.74 | 30.32 |
| CDY30768 | Canola | nucleus | 35.98 | 29.82 |
| KRH43324 | Soybean | nucleus | 21.16 | 29.41 |
| CDY45238 | Canola | nucleus | 35.98 | 28.81 |
| Zm00001d009604_P001 | Maize | cytosol, nucleus, plastid | 29.63 | 27.59 |
| TraesCS3B01G269000.1 | Wheat | cytosol, extracellular, nucleus | 31.75 | 26.79 |
| CDY68751 | Canola | cytosol, mitochondrion | 14.29 | 26.73 |
| GSMUA_Achr6P27250_001 | Banana | cytosol, extracellular, nucleus | 32.8 | 26.72 |
| Zm00001d043969_P001 | Maize | endoplasmic reticulum | 32.8 | 26.61 |
| GSMUA_Achr3P31070_001 | Banana | cytosol, nucleus, plastid | 29.63 | 26.54 |
| TraesCS3D01G241100.1 | Wheat | cytosol, extracellular, nucleus | 32.28 | 26.52 |
| HORVU3Hr1G059870.2 | Barley | cytosol, extracellular, nucleus | 32.28 | 26.29 |
| TraesCS3A01G240800.1 | Wheat | cytosol, extracellular, nucleus | 32.28 | 26.07 |
| CDY25008 | Canola | nucleus | 13.76 | 26.0 |
| GSMUA_Achr7P25620_001 | Banana | nucleus | 31.75 | 25.75 |
| CDX87024 | Canola | nucleus | 13.76 | 25.24 |
| Os01t0662800-00 | Rice | cytosol, extracellular, nucleus | 32.28 | 25.21 |
| KXG33047 | Sorghum | extracellular | 32.28 | 25.0 |
| Os05t0567900-00 | Rice | cytosol, extracellular, plastid | 32.8 | 24.8 |
| EES19963 | Sorghum | mitochondrion, nucleus, vacuole | 29.1 | 24.02 |
| CDY05639 | Canola | nucleus | 14.81 | 21.37 |
| CDX85400 | Canola | nucleus | 14.29 | 21.26 |
| CDX86241 | Canola | nucleus | 14.29 | 21.26 |
| CDY34933 | Canola | nucleus | 14.81 | 20.0 |
| CDY33918 | Canola | nucleus | 14.29 | 19.15 |
| CDX95897 | Canola | nucleus | 15.87 | 18.29 |
| CDX92103 | Canola | nucleus | 15.87 | 18.07 |
| CDY34429 | Canola | cytosol | 14.29 | 17.65 |
| CDX80603 | Canola | nucleus | 13.23 | 17.01 |
| CDX90545 | Canola | nucleus | 13.23 | 17.01 |
| CDX75893 | Canola | nucleus | 15.34 | 15.85 |
| CDX82388 | Canola | nucleus | 14.29 | 15.52 |
| CDY34981 | Canola | nucleus | 13.76 | 15.2 |
| CDY32214 | Canola | nucleus | 14.29 | 15.08 |
| CDY52723 | Canola | nucleus | 14.29 | 15.0 |
| CDY09717 | Canola | nucleus | 13.76 | 14.69 |
| CDX88593 | Canola | nucleus | 22.75 | 12.11 |
| CDY65439 | Canola | nucleus | 22.75 | 11.2 |
| CDY42753 | Canola | nucleus | 21.69 | 11.08 |
| CDY42752 | Canola | nucleus | 21.69 | 11.08 |
| CDY67546 | Canola | nucleus | 21.69 | 10.9 |
| CDY67979 | Canola | nucleus | 22.22 | 10.71 |
| CDY20709 | Canola | nucleus | 22.22 | 10.66 |
| CDY32755 | Canola | nucleus | 20.63 | 10.08 |
| CDY32891 | Canola | nucleus | 20.11 | 9.79 |
| CDX89358 | Canola | nucleus | 18.52 | 9.72 |
| CDX94365 | Canola | nucleus | 18.52 | 9.72 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078JVW3 | UniProt:A0A078JVW3 | EnsemblPlants:CDY69687 | ProteinID:CDY69687 |
| ProteinID:CDY69687.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00091493001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF305 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0004EDFFEE | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
BnaAnng31200DBnaAnng31200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVW3]
Coordinates
chrLK040054:+:2578..3401
Molecular Weight (calculated)
20787.6 Da
IEP (calculated)
8.591
GRAVY (calculated)
-0.880
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGFSMFFSE NDVVHHSSAY ASVDCTLSLG TPSTRLCNDD DDRRFSSHTS NNISNALGSW DFLHGGKKGG GGGGNNLLAR RCANCDTTST PLWRNGPRGP
101: KSLCNACGIR FKKEERRAST ARNSTSGGVS TAAAGVPASD HHGVTNYYYN NNNNNNNHYD SSSPWIHHQH QNTQRVPYYS PANNEYFFR
101: KSLCNACGIR FKKEERRAST ARNSTSGGVS TAAAGVPASD HHGVTNYYYN NNNNNNNHYD SSSPWIHHQH QNTQRVPYYS PANNEYFFR
001: MMGYQTNSNF SMFFSSENDD QNHHNYDPYN NFSSSTSVDC TLSLGTPSTR LDDHHRFSSA NSNNISGDFY IHGGNAKTSS YKKGGVAHSL PRRCASCDTT
101: STPLWRNGPK GPKSLCNACG IRFKKEERRA TARNLTISGG GSSAAEVPVE NSYNGGGNYY SHHHHHYASS SPSWAHQNTQ RVPYFSPVPE MEYPYVDNVT
201: ASSFMSWN
101: STPLWRNGPK GPKSLCNACG IRFKKEERRA TARNLTISGG GSSAAEVPVE NSYNGGGNYY SHHHHHYASS SPSWAHQNTQ RVPYFSPVPE MEYPYVDNVT
201: ASSFMSWN
Arabidopsis Description
GATA20HANL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.