Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42753 | Canola | nucleus | 99.73 | 99.73 |
| Bra019118.1-P | Field mustard | nucleus | 99.19 | 94.59 |
| CDY67546 | Canola | nucleus | 95.14 | 93.62 |
| CDX94365 | Canola | nucleus | 69.46 | 71.39 |
| CDX89358 | Canola | nucleus | 68.11 | 70.0 |
| AT4G26150.1 | Thale cress | cytosol | 66.49 | 69.89 |
| CDY67979 | Canola | nucleus | 53.24 | 50.26 |
| CDY20709 | Canola | nucleus | 53.24 | 50.0 |
| CDY32891 | Canola | nucleus | 51.89 | 49.48 |
| CDY65439 | Canola | nucleus | 51.08 | 49.22 |
| CDY32755 | Canola | nucleus | 51.08 | 48.84 |
| CDX88593 | Canola | nucleus | 45.14 | 47.04 |
| CDY25008 | Canola | nucleus | 10.54 | 39.0 |
| CDX87024 | Canola | nucleus | 10.81 | 38.84 |
| CDX85400 | Canola | nucleus | 12.97 | 37.8 |
| GSMUA_Achr8P24880_001 | Banana | nucleus | 22.16 | 37.61 |
| CDX86241 | Canola | nucleus | 12.7 | 37.01 |
| CDY05639 | Canola | nucleus | 12.97 | 36.64 |
| KRH19153 | Soybean | nucleus | 30.27 | 35.67 |
| KRH02716 | Soybean | nucleus | 30.0 | 34.47 |
| CDY33918 | Canola | nucleus | 12.97 | 34.04 |
| KRH12382 | Soybean | nucleus | 28.38 | 33.33 |
| CDY68751 | Canola | cytosol, mitochondrion | 8.92 | 32.67 |
| CDY34933 | Canola | nucleus | 12.16 | 32.14 |
| CDX90545 | Canola | nucleus | 12.16 | 30.61 |
| KRH37384 | Soybean | nucleus | 27.84 | 30.56 |
| CDY34429 | Canola | cytosol | 12.43 | 30.07 |
| CDY34981 | Canola | nucleus | 12.97 | 28.07 |
| CDX92103 | Canola | nucleus | 12.43 | 27.71 |
| CDX82388 | Canola | nucleus | 12.97 | 27.59 |
| TraesCS7D01G359900.1 | Wheat | nucleus | 26.76 | 27.58 |
| TraesCS7A01G363100.1 | Wheat | nucleus | 26.49 | 27.53 |
| CDY52723 | Canola | nucleus | 13.24 | 27.22 |
| HORVU7Hr1G086810.1 | Barley | nucleus | 26.49 | 27.22 |
| TraesCS6A01G185900.1 | Wheat | cytosol | 24.86 | 26.9 |
| CDX75893 | Canola | nucleus | 13.24 | 26.78 |
| HORVU6Hr1G039720.2 | Barley | cytosol | 24.86 | 26.74 |
| TraesCS6D01G173000.1 | Wheat | cytosol | 24.59 | 26.61 |
| TraesCS7B01G264800.1 | Wheat | nucleus | 25.95 | 26.59 |
| CDY32214 | Canola | nucleus | 12.7 | 26.26 |
| CDX95897 | Canola | nucleus | 11.62 | 26.22 |
| Os02t0220400-01 | Rice | nucleus | 24.86 | 26.06 |
| CDY09717 | Canola | nucleus | 12.43 | 25.99 |
| Zm00001d016361_P001 | Maize | nucleus | 25.95 | 25.95 |
| Zm00001d046354_P001 | Maize | nucleus | 25.68 | 25.68 |
| TraesCS6B01G214900.1 | Wheat | cytosol | 23.51 | 25.44 |
| EER88552 | Sorghum | nucleus | 26.49 | 25.39 |
| Os06t0571800-02 | Rice | nucleus | 23.78 | 25.36 |
| CDX80603 | Canola | nucleus | 10.0 | 25.17 |
| KXG29816 | Sorghum | nucleus | 25.41 | 24.29 |
| CDY68627 | Canola | nucleus | 13.51 | 22.52 |
| CDY53079 | Canola | cytosol | 12.43 | 22.22 |
| CDX69237 | Canola | nucleus | 13.24 | 21.97 |
| CDY60289 | Canola | nucleus | 11.89 | 21.78 |
| CDY69687 | Canola | nucleus | 11.08 | 21.69 |
| CDY13040 | Canola | cytosol | 11.35 | 21.11 |
| CDY70754 | Canola | nucleus | 12.7 | 21.08 |
| CDY51221 | Canola | nucleus | 11.35 | 20.9 |
| CDY24779 | Canola | nucleus | 11.89 | 20.66 |
| CDX72587 | Canola | cytosol | 12.43 | 20.26 |
| CDY72649 | Canola | nucleus | 10.81 | 20.0 |
| CDY45238 | Canola | nucleus | 11.62 | 18.22 |
| CDX77958 | Canola | nucleus | 12.97 | 18.05 |
| CDY30768 | Canola | nucleus | 10.81 | 17.54 |
| CDY28986 | Canola | cytosol | 12.97 | 17.52 |
| CDX90680 | Canola | nucleus | 12.97 | 17.27 |
| CDX73777 | Canola | nucleus | 13.24 | 16.9 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078HY02 | UniProt:A0A078HY02 | EnsemblPlants:CDY42752 | ProteinID:CDY42752 |
| ProteinID:CDY42752.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00075299001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF191 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0004EDFD00 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
BnaA03g47870DBnaA03g47870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HY02]
Coordinates
chrLK032533:-:127448..129129
Molecular Weight (calculated)
41392.4 Da
IEP (calculated)
9.742
GRAVY (calculated)
-0.830
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNFRYTID LNEDHQNHQP FFSSFGSSIH QNHDHQQNVY HHQALSNPTF SSSSLASPSL SYLPFLINSH QDQVHVGYNN HTFHGFLDPH ISQPLETKKF
101: VYDGGSSSSD QMTPEKETRL KLTIRKNDNH HDQTDLPQYP TKGETESNSL KWMSSKVRFM KRKTMITPTD NNKQYVKNDQ SLNVSNLEED HLNKISKNHY
201: NMIANENGYN GSNNCVTRIC SDCNTTKTPL WRSGPRGPKS LCNACGIRQR KARRAAMAAS GATTTSDLSP PLLKKKIQNK NKRSNKVGSL SSPLASKVHK
301: YKSMTTSVAE ATQGKSTMSS SSTSSSSNKC YFDELAIILS KSSAYQQVFP QDEKEAAILL MALSYGMVHG
101: VYDGGSSSSD QMTPEKETRL KLTIRKNDNH HDQTDLPQYP TKGETESNSL KWMSSKVRFM KRKTMITPTD NNKQYVKNDQ SLNVSNLEED HLNKISKNHY
201: NMIANENGYN GSNNCVTRIC SDCNTTKTPL WRSGPRGPKS LCNACGIRQR KARRAAMAAS GATTTSDLSP PLLKKKIQNK NKRSNKVGSL SSPLASKVHK
301: YKSMTTSVAE ATQGKSTMSS SSTSSSSNKC YFDELAIILS KSSAYQQVFP QDEKEAAILL MALSYGMVHG
001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
Arabidopsis Description
GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.