Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020650.1-P | Field mustard | nucleus | 95.74 | 96.43 |
| CDY05639 | Canola | nucleus | 87.23 | 93.89 |
| CDX86241 | Canola | nucleus | 72.34 | 80.31 |
| CDX85400 | Canola | nucleus | 72.34 | 80.31 |
| AT5G49300.1 | Thale cress | cytosol | 74.47 | 75.54 |
| CDY34933 | Canola | nucleus | 58.16 | 58.57 |
| VIT_05s0077g01450.t01 | Wine grape | nucleus | 60.99 | 56.21 |
| KRH02314 | Soybean | nucleus | 52.48 | 52.86 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 43.26 | 49.19 |
| CDY25008 | Canola | nucleus | 33.33 | 47.0 |
| CDX87024 | Canola | nucleus | 34.04 | 46.6 |
| KRH50773 | Soybean | nucleus | 50.35 | 44.94 |
| CDX92103 | Canola | nucleus | 51.77 | 43.98 |
| CDY34429 | Canola | cytosol | 46.1 | 42.48 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 44.68 | 42.28 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 42.55 | 42.25 |
| CDX90545 | Canola | nucleus | 43.97 | 42.18 |
| CDX95897 | Canola | nucleus | 48.94 | 42.07 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 37.59 | 42.06 |
| PGSC0003DMT400011779 | Potato | nucleus | 48.94 | 41.07 |
| Solyc12g099370.1.1 | Tomato | nucleus | 48.94 | 41.07 |
| CDY34981 | Canola | nucleus | 48.94 | 40.35 |
| CDY52723 | Canola | nucleus | 49.65 | 38.89 |
| Os01t0976800-01 | Rice | nucleus | 39.01 | 38.73 |
| CDY09717 | Canola | nucleus | 48.23 | 38.42 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 38.3 | 38.03 |
| CDY32214 | Canola | nucleus | 48.23 | 37.99 |
| CDX82388 | Canola | nucleus | 46.1 | 37.36 |
| EER93149 | Sorghum | nucleus | 41.13 | 36.94 |
| CDX75893 | Canola | nucleus | 46.81 | 36.07 |
| Solyc05g054400.2.1 | Tomato | nucleus | 48.94 | 35.03 |
| PGSC0003DMT400060241 | Potato | nucleus | 48.94 | 35.03 |
| Zm00001d034751_P001 | Maize | nucleus | 40.43 | 34.97 |
| CDY68751 | Canola | cytosol, mitochondrion | 24.82 | 34.65 |
| HORVU5Hr1G116310.1 | Barley | nucleus | 39.01 | 33.95 |
| TraesCS5D01G508800.1 | Wheat | nucleus | 38.3 | 33.33 |
| TraesCS3A01G538400.1 | Wheat | nucleus | 39.01 | 32.74 |
| TraesCS5B01G508800.1 | Wheat | nucleus | 38.3 | 32.34 |
| CDX80603 | Canola | nucleus | 32.62 | 31.29 |
| Zm00001d037605_P001 | Maize | nucleus | 31.21 | 30.77 |
| TraesCS3D01G544000.1 | Wheat | nucleus | 38.3 | 30.17 |
| HORVU6Hr1G093630.3 | Barley | mitochondrion | 28.37 | 29.85 |
| KXG32453 | Sorghum | nucleus | 26.24 | 29.6 |
| TraesCS3B01G603900.1 | Wheat | nucleus | 37.59 | 29.44 |
| Zm00001d011771_P001 | Maize | nucleus | 40.43 | 29.23 |
| EES04307 | Sorghum | nucleus | 43.97 | 28.57 |
| Os01t0343300-01 | Rice | nucleus | 26.24 | 28.24 |
| TraesCS4A01G364700.1 | Wheat | nucleus | 35.46 | 27.62 |
| Zm00001d009193_P001 | Maize | plastid | 26.95 | 27.34 |
| KXG21349 | Sorghum | cytosol | 29.79 | 26.92 |
| TraesCS1B01G126600.1 | Wheat | cytosol | 27.66 | 26.71 |
| TraesCS1D01G106100.1 | Wheat | cytosol | 26.95 | 26.03 |
| Zm00001d040775_P001 | Maize | nucleus | 26.24 | 25.17 |
| TraesCS1A01G097300.1 | Wheat | cytosol | 26.95 | 23.9 |
| Os05t0155400-01 | Rice | mitochondrion, nucleus, vacuole | 30.5 | 22.28 |
| HORVU1Hr1G022710.3 | Barley | plastid | 26.95 | 17.59 |
| CDY13040 | Canola | cytosol | 21.99 | 15.58 |
| CDY72649 | Canola | nucleus | 21.99 | 15.5 |
| CDY53079 | Canola | cytosol | 22.7 | 15.46 |
| CDY60289 | Canola | nucleus | 21.99 | 15.35 |
| CDY51221 | Canola | nucleus | 21.28 | 14.93 |
| CDY68627 | Canola | nucleus | 22.7 | 14.41 |
| CDX69237 | Canola | nucleus | 22.7 | 14.35 |
| CDY69687 | Canola | nucleus | 19.15 | 14.29 |
| CDX72587 | Canola | cytosol | 22.7 | 14.1 |
| CDY24779 | Canola | nucleus | 21.28 | 14.08 |
| CDY45238 | Canola | nucleus | 23.4 | 13.98 |
| CDY70754 | Canola | nucleus | 21.99 | 13.9 |
| CDX94365 | Canola | nucleus | 34.75 | 13.61 |
| CDX77958 | Canola | nucleus | 25.53 | 13.53 |
| CDX88593 | Canola | nucleus | 33.33 | 13.24 |
| CDY30768 | Canola | nucleus | 21.28 | 13.16 |
| CDX89358 | Canola | nucleus | 33.33 | 13.06 |
| CDY42752 | Canola | nucleus | 34.04 | 12.97 |
| CDY42753 | Canola | nucleus | 34.04 | 12.97 |
| CDX73777 | Canola | nucleus | 26.24 | 12.76 |
| CDY67546 | Canola | nucleus | 33.33 | 12.5 |
| CDY28986 | Canola | cytosol | 24.11 | 12.41 |
| CDX90680 | Canola | nucleus | 24.11 | 12.23 |
| CDY32755 | Canola | nucleus | 33.33 | 12.14 |
| CDY67979 | Canola | nucleus | 33.33 | 11.99 |
| CDY65439 | Canola | nucleus | 32.62 | 11.98 |
| CDY20709 | Canola | nucleus | 33.33 | 11.93 |
| CDY32891 | Canola | nucleus | 32.62 | 11.86 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078HAQ1 | UniProt:A0A078HAQ1 | EnsemblPlants:CDY33918 | ProteinID:CDY33918 |
| ProteinID:CDY33918.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00055426001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF242 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0004EDFC38 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
BnaA02g30690DBnaA02g30690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAQ1]
Coordinates
chrLK032324:+:269471..270181
Molecular Weight (calculated)
15569.7 Da
IEP (calculated)
10.070
GRAVY (calculated)
-1.017
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDHSEEEYS ETMKKIAEDA IEQNRTCSNE KKTCADCGTS KTPLWRGGPA GPKSLCNACG IRNRKRRRGV EDKKQPKKTN SGGGGGGDLK RSPKVGESMK
101: QRMMDLGMTK RSRVEKQLRK LGEEEQAAVL LMALSYGSVY A
101: QRMMDLGMTK RSRVEKQLRK LGEEEQAAVL LMALSYGSVY A
001: MLDHSEKVLL VDSETMKTRA EDMIEQNNTS VNDKKKTCAD CGTSKTPLWR GGPVGPKSLC NACGIRNRKK RRGGTEDNKK LKKSSSGGGN RKFGESLKQS
101: LMDLGIRKRS TVEKQRQKLG EEEQAAVLLM ALSYGSVYA
101: LMDLGIRKRS TVEKQRQKLG EEEQAAVLLM ALSYGSVYA
Arabidopsis Description
GATA16Uncharacterized protein At5g49300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.