Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G508800.1 | Wheat | nucleus | 93.21 | 93.21 |
| TraesCS5B01G508800.1 | Wheat | nucleus | 93.83 | 91.02 |
| HORVU6Hr1G093630.3 | Barley | mitochondrion | 72.84 | 88.06 |
| TraesCS4A01G364700.1 | Wheat | nucleus | 87.65 | 78.45 |
| EER93149 | Sorghum | nucleus | 69.75 | 71.97 |
| Zm00001d034751_P001 | Maize | nucleus | 69.14 | 68.71 |
| Solyc09g075610.2.1 | Tomato | plastid | 30.25 | 55.06 |
| KRH68462 | Soybean | cytosol | 27.16 | 55.0 |
| PGSC0003DMT400081417 | Potato | nucleus | 31.48 | 48.11 |
| VIT_14s0060g01520.t01 | Wine grape | nucleus | 36.42 | 47.58 |
| KRG96744 | Soybean | cytosol, mitochondrion, nucleus | 24.07 | 46.99 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 34.57 | 45.16 |
| CDX85400 | Canola | nucleus | 35.19 | 44.88 |
| Bra037421.1-P | Field mustard | nucleus | 33.33 | 42.52 |
| CDX86241 | Canola | nucleus | 33.33 | 42.52 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 38.89 | 42.28 |
| CDX87024 | Canola | nucleus | 26.54 | 41.75 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 35.8 | 40.85 |
| Bra036600.1-P | Field mustard | nucleus | 25.93 | 40.78 |
| VIT_05s0077g01450.t01 | Wine grape | nucleus | 38.27 | 40.52 |
| Bra009926.1-P | Field mustard | cytosol | 19.75 | 40.51 |
| PGSC0003DMT400063771 | Potato | nucleus | 37.65 | 40.4 |
| Solyc01g100220.2.1 | Tomato | nucleus | 37.04 | 40.27 |
| CDY25008 | Canola | nucleus | 24.69 | 40.0 |
| KRH02314 | Soybean | nucleus | 34.57 | 40.0 |
| CDY05639 | Canola | nucleus | 32.1 | 39.69 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 34.57 | 39.44 |
| Bra020650.1-P | Field mustard | nucleus | 33.95 | 39.29 |
| CDY33918 | Canola | nucleus | 33.95 | 39.01 |
| AT3G06740.1 | Thale cress | nucleus | 35.8 | 38.93 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 30.25 | 38.89 |
| CDY34933 | Canola | nucleus | 32.1 | 37.14 |
| PGSC0003DMT400011779 | Potato | nucleus | 38.27 | 36.9 |
| Solyc12g099370.1.1 | Tomato | nucleus | 38.27 | 36.9 |
| AT5G49300.1 | Thale cress | cytosol | 31.48 | 36.69 |
| Bra040288.1-P | Field mustard | nucleus | 31.48 | 36.69 |
| AT5G26930.1 | Thale cress | cytosol | 27.16 | 36.67 |
| CDY34429 | Canola | cytosol | 34.57 | 36.6 |
| KRH50773 | Soybean | nucleus | 34.57 | 35.44 |
| CDX90545 | Canola | nucleus | 32.1 | 35.37 |
| Bra012742.1-P | Field mustard | nucleus | 34.57 | 33.53 |
| PGSC0003DMT400060241 | Potato | nucleus | 40.74 | 33.5 |
| Solyc05g054400.2.1 | Tomato | nucleus | 40.12 | 32.99 |
| Bra033533.1-P | Field mustard | nucleus | 36.42 | 32.96 |
| CDY32214 | Canola | nucleus | 36.42 | 32.96 |
| CDX95897 | Canola | nucleus | 32.72 | 32.32 |
| CDX92103 | Canola | nucleus | 32.72 | 31.93 |
| CDY68751 | Canola | cytosol, mitochondrion | 19.75 | 31.68 |
| CDY09717 | Canola | nucleus | 34.57 | 31.64 |
| CDX82388 | Canola | nucleus | 33.95 | 31.61 |
| Bra022184.1-P | Field mustard | nucleus | 32.1 | 31.33 |
| Bra021209.1-P | Field mustard | nucleus | 32.1 | 30.41 |
| CDY34981 | Canola | nucleus | 32.1 | 30.41 |
| CDX75893 | Canola | nucleus | 33.33 | 29.51 |
| CDY52723 | Canola | nucleus | 32.72 | 29.44 |
| AT4G16141.1 | Thale cress | cytosol | 35.8 | 29.44 |
| AT3G16870.1 | Thale cress | nucleus | 33.95 | 28.95 |
| CDX80603 | Canola | nucleus | 25.93 | 28.57 |
| HORVU1Hr1G022710.3 | Barley | plastid | 30.25 | 22.69 |
| HORVU3Hr1G059870.2 | Barley | cytosol, extracellular, nucleus | 20.37 | 14.22 |
| HORVU1Hr1G091450.3 | Barley | plastid | 17.9 | 13.36 |
| HORVU7Hr1G086810.1 | Barley | nucleus | 27.78 | 12.5 |
| HORVU6Hr1G039720.2 | Barley | cytosol | 26.54 | 12.5 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | UniProt:A0A287SUV0 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:HORVU5Hr1G116310 |
| EnsemblPlants:HORVU5Hr1G116310.1 | InterPro:IPR000679 | InterPro:IPR013088 | PFAM:PF00320 | PFscan:PS50114 | PANTHER:PTHR10071 |
| PANTHER:PTHR10071:SF279 | SMART:SM00401 | SUPFAM:SSF57716 | UniParc:UPI000B461892 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:647629286..647630859
Molecular Weight (calculated)
17396.0 Da
IEP (calculated)
10.906
GRAVY (calculated)
-0.773
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSVEKGSG SLDPGERPAS GSQPKACTAC NTTKTPLWRG GPSGPMSLCN ACGIRYRKKR REALGLDEPP KKRQPAAAAS AAVAAACSEA GGESAEPDQQ
101: QQQPKKKTTT TKRGREVELR VVGFGKEVVL KQRRRMRRRR RLGEEEKAAI LLMALSSGVI YG
101: QQQPKKKTTT TKRGREVELR VVGFGKEVVL KQRRRMRRRR RLGEEEKAAI LLMALSSGVI YG
001: MLDPTEKVID SESMESKLTS VDAIEEHSSS SSNEAISNEK KSCAICGTSK TPLWRGGPAG PKSLCNACGI RNRKKRRTLI SNRSEDKKKK SHNRNPKFGD
101: SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
101: SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
Arabidopsis Description
GATA15GATA transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.