Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH50773 | Soybean | nucleus | 90.71 | 80.38 |
KRH68462 | Soybean | cytosol | 37.14 | 65.0 |
VIT_05s0077g01450.t01 | Wine grape | nucleus | 68.57 | 62.75 |
KRG96744 | Soybean | cytosol, mitochondrion, nucleus | 32.86 | 55.42 |
CDY05639 | Canola | nucleus | 50.71 | 54.2 |
Bra037421.1-P | Field mustard | nucleus | 47.86 | 52.76 |
CDX86241 | Canola | nucleus | 47.86 | 52.76 |
CDY33918 | Canola | nucleus | 52.86 | 52.48 |
CDX85400 | Canola | nucleus | 47.14 | 51.97 |
AT5G49300.1 | Thale cress | cytosol | 51.43 | 51.8 |
Bra020650.1-P | Field mustard | nucleus | 50.71 | 50.71 |
Bra040288.1-P | Field mustard | nucleus | 49.29 | 49.64 |
AT3G06740.1 | Thale cress | nucleus | 52.14 | 48.99 |
CDY34933 | Canola | nucleus | 48.57 | 48.57 |
GSMUA_Achr3P00700_001 | Banana | nucleus | 40.71 | 45.97 |
PGSC0003DMT400011779 | Potato | nucleus | 52.14 | 43.45 |
Solyc12g099370.1.1 | Tomato | nucleus | 51.43 | 42.86 |
GSMUA_Achr1P26550_001 | Banana | nucleus | 42.14 | 41.55 |
GSMUA_Achr8P33850_001 | Banana | nucleus | 43.57 | 40.94 |
Os01t0976800-01 | Rice | nucleus | 41.43 | 40.85 |
GSMUA_Achr1P14780_001 | Banana | nucleus | 35.71 | 39.68 |
GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 37.86 | 37.32 |
EER93149 | Sorghum | nucleus | 40.0 | 35.67 |
HORVU5Hr1G116310.1 | Barley | nucleus | 40.0 | 34.57 |
Solyc05g054400.2.1 | Tomato | nucleus | 48.57 | 34.52 |
PGSC0003DMT400060241 | Potato | nucleus | 48.57 | 34.52 |
TraesCS5D01G508800.1 | Wheat | nucleus | 39.29 | 33.95 |
Zm00001d034751_P001 | Maize | nucleus | 39.29 | 33.74 |
TraesCS5B01G508800.1 | Wheat | nucleus | 39.29 | 32.93 |
TraesCS3A01G538400.1 | Wheat | nucleus | 39.29 | 32.74 |
TraesCS3D01G544000.1 | Wheat | nucleus | 39.29 | 30.73 |
TraesCS3B01G603900.1 | Wheat | nucleus | 39.29 | 30.56 |
Os01t0343300-01 | Rice | nucleus | 27.86 | 29.77 |
KXG32453 | Sorghum | nucleus | 26.43 | 29.6 |
Zm00001d037605_P001 | Maize | nucleus | 30.0 | 29.37 |
HORVU6Hr1G093630.3 | Barley | mitochondrion | 27.86 | 29.1 |
Zm00001d011771_P001 | Maize | nucleus | 39.29 | 28.21 |
TraesCS4A01G364700.1 | Wheat | nucleus | 36.43 | 28.18 |
Zm00001d009193_P001 | Maize | plastid | 27.14 | 27.34 |
EES04307 | Sorghum | nucleus | 42.14 | 27.19 |
KXG21349 | Sorghum | cytosol | 29.29 | 26.28 |
TraesCS1D01G106100.1 | Wheat | cytosol | 26.43 | 25.34 |
TraesCS1B01G126600.1 | Wheat | cytosol | 26.43 | 25.34 |
Zm00001d040775_P001 | Maize | nucleus | 26.43 | 25.17 |
TraesCS1A01G097300.1 | Wheat | cytosol | 26.43 | 23.27 |
Os05t0155400-01 | Rice | mitochondrion, nucleus, vacuole | 29.29 | 21.24 |
KRH30068 | Soybean | plastid | 21.43 | 19.23 |
HORVU1Hr1G022710.3 | Barley | plastid | 26.43 | 17.13 |
KRH12382 | Soybean | nucleus | 37.86 | 16.83 |
KRH19153 | Soybean | nucleus | 37.14 | 16.56 |
KRH02716 | Soybean | nucleus | 37.86 | 16.46 |
KRH61505 | Soybean | nucleus | 32.14 | 15.41 |
KRH37384 | Soybean | nucleus | 35.71 | 14.84 |
KRH28681 | Soybean | nucleus | 25.0 | 14.29 |
KRH15535 | Soybean | nucleus | 30.71 | 14.05 |
KRH05458 | Soybean | nucleus | 30.71 | 14.05 |
KRH43324 | Soybean | nucleus | 13.57 | 13.97 |
KRH08269 | Soybean | nucleus | 25.0 | 13.94 |
KRH69915 | Soybean | nucleus | 24.29 | 13.49 |
Protein Annotations
EntrezGene:100789636 | MapMan:15.5.1.3 | Gene3D:3.30.50.10 | EMBL:ACUP02010302 | EnsemblPlantsGene:GLYMA_17G030900 | GO:GO:0000977 |
GO:GO:0001085 | GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 |
GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0005667 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006366 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
GO:GO:0045944 | GO:GO:0046872 | UniProt:I1MRN5 | InterPro:IPR000679 | InterPro:IPR013088 | EnsemblPlants:KRH02314 |
ProteinID:KRH02314 | ProteinID:KRH02314.1 | PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 |
PANTHER:PTHR10071:SF242 | SMART:SM00401 | SUPFAM:SSF57716 | UniParc:UPI000233F0B4 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:2273938..2275123
Molecular Weight (calculated)
14426.1 Da
IEP (calculated)
10.221
GRAVY (calculated)
-0.720
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDPTGKGSE VEVEDSNSNP NAPSSGNSPS SNNEQKKTCA DCGTTKTPLW RGGPAGPKSL CNACGIRSRK KKRAILGINK GSTEDGRKGK RTGGGGGIGG
101: IGGGALGREV LLHRSHWKKL GEEEKAAVLL MSLSYGSVYA
101: IGGGALGREV LLHRSHWKKL GEEEKAAVLL MSLSYGSVYA
001: MLDPTEKVID SESMESKLTS VDAIEEHSSS SSNEAISNEK KSCAICGTSK TPLWRGGPAG PKSLCNACGI RNRKKRRTLI SNRSEDKKKK SHNRNPKFGD
101: SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
101: SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
Arabidopsis Description
GATA15GATA transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.