Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15535 | Soybean | nucleus | 84.64 | 84.64 |
| KRH61505 | Soybean | nucleus | 45.1 | 47.26 |
| KRH68462 | Soybean | cytosol | 12.09 | 46.25 |
| KRG96744 | Soybean | cytosol, mitochondrion, nucleus | 10.13 | 37.35 |
| GSMUA_Achr10P... | Banana | mitochondrion | 22.88 | 35.0 |
| VIT_04s0008g01290.t01 | Wine grape | plastid | 34.97 | 34.97 |
| GSMUA_Achr2P15750_001 | Banana | plastid | 15.03 | 34.59 |
| KRH02314 | Soybean | nucleus | 14.05 | 30.71 |
| Solyc07g038160.2.1 | Tomato | nucleus | 26.47 | 30.45 |
| KRH19153 | Soybean | nucleus | 30.39 | 29.62 |
| KRH02716 | Soybean | nucleus | 30.72 | 29.19 |
| GSMUA_Achr4P30820_001 | Banana | nucleus | 25.16 | 28.41 |
| PGSC0003DMT400011449 | Potato | nucleus | 26.47 | 28.32 |
| KRH50773 | Soybean | nucleus | 14.05 | 27.22 |
| KRH12382 | Soybean | nucleus | 27.45 | 26.67 |
| PGSC0003DMT400000761 | Potato | nucleus | 23.53 | 25.09 |
| Solyc12g008830.1.1 | Tomato | nucleus | 23.2 | 24.23 |
| KRH37384 | Soybean | nucleus | 26.14 | 23.74 |
| KRH30068 | Soybean | plastid | 11.76 | 23.08 |
| TraesCS6D01G173000.1 | Wheat | cytosol | 25.49 | 22.81 |
| TraesCS6B01G214900.1 | Wheat | cytosol | 25.49 | 22.81 |
| TraesCS6A01G185900.1 | Wheat | cytosol | 25.16 | 22.51 |
| Os02t0220400-01 | Rice | nucleus | 24.51 | 21.25 |
| HORVU6Hr1G039720.2 | Barley | cytosol | 23.86 | 21.22 |
| TraesCS7A01G363100.1 | Wheat | nucleus | 24.18 | 20.79 |
| Bra001644.1-P | Field mustard | nucleus | 9.8 | 20.55 |
| TraesCS7D01G359900.1 | Wheat | nucleus | 23.86 | 20.33 |
| HORVU7Hr1G086810.1 | Barley | nucleus | 23.86 | 20.28 |
| Zm00001d046354_P001 | Maize | nucleus | 24.18 | 20.0 |
| TraesCS7B01G264800.1 | Wheat | nucleus | 23.53 | 19.94 |
| Zm00001d016361_P001 | Maize | nucleus | 23.53 | 19.46 |
| Os06t0571800-02 | Rice | nucleus | 21.9 | 19.31 |
| EER88552 | Sorghum | nucleus | 24.18 | 19.17 |
| KXG29816 | Sorghum | nucleus | 24.18 | 19.12 |
| KRH28681 | Soybean | nucleus | 15.03 | 18.78 |
| KRH08269 | Soybean | nucleus | 15.03 | 18.33 |
| KRH69915 | Soybean | nucleus | 14.38 | 17.46 |
| KRH43324 | Soybean | nucleus | 7.19 | 16.18 |
Protein Annotations
| EntrezGene:102664611 | MapMan:15.5.1.3 | Gene3D:3.30.50.10 | EMBL:ACUP02010746 | EnsemblPlantsGene:GLYMA_17G228700 | GO:GO:0000977 |
| GO:GO:0001085 | GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005667 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006366 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0045944 | GO:GO:0046872 | UniProt:I1MXA9 | InterPro:IPR000679 | InterPro:IPR013088 | EnsemblPlants:KRH05458 |
| ProteinID:KRH05458 | ProteinID:KRH05458.1 | PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 |
| PANTHER:PTHR10071:SF226 | SMART:SM00401 | SUPFAM:SSF57716 | UniParc:UPI0000E647E8 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:38364416..38367780
Molecular Weight (calculated)
34006.2 Da
IEP (calculated)
9.733
GRAVY (calculated)
-0.743
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPYSLNPPG PSIQAGQTQL FNISPNNQDC RTIFNIFDPR KTRIEIGGLR DNYHQQDDKM MVLHDGSSSN SNKSSFNNNI SPEPVVVMVD PIISSACDQQ
101: HNLPYEEESK NIDDHGSGNK WMSSKMRLMK KMMRPSMSPT TDKAINSGLE SSSSRYSQRS LCNNNASSTT RVCSDCNTST TPLWRSGPKG PKSLCNACGI
201: RQRKARRAMT KATSGLITPI TCAKTRVHNK EKKSRANHFA QFKNKYKSTT TTSAGSSEGV RKLEYLKDFA ISLRSNNSDF EQGFPRDEVA EAALLLMDLS
301: CGFVHL
101: HNLPYEEESK NIDDHGSGNK WMSSKMRLMK KMMRPSMSPT TDKAINSGLE SSSSRYSQRS LCNNNASSTT RVCSDCNTST TPLWRSGPKG PKSLCNACGI
201: RQRKARRAMT KATSGLITPI TCAKTRVHNK EKKSRANHFA QFKNKYKSTT TTSAGSSEGV RKLEYLKDFA ISLRSNNSDF EQGFPRDEVA EAALLLMDLS
301: CGFVHL
001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
Arabidopsis Description
GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.