Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68462 | Soybean | cytosol | 13.7 | 50.0 |
| KRH05458 | Soybean | nucleus | 47.26 | 45.1 |
| KRH15535 | Soybean | nucleus | 46.58 | 44.44 |
| KRG96744 | Soybean | cytosol, mitochondrion, nucleus | 10.96 | 38.55 |
| GSMUA_Achr10P... | Banana | mitochondrion | 25.68 | 37.5 |
| GSMUA_Achr2P15750_001 | Banana | plastid | 16.78 | 36.84 |
| VIT_04s0008g01290.t01 | Wine grape | plastid | 36.99 | 35.29 |
| Solyc07g038160.2.1 | Tomato | nucleus | 29.45 | 32.33 |
| KRH02314 | Soybean | nucleus | 15.41 | 32.14 |
| PGSC0003DMT400011449 | Potato | nucleus | 30.82 | 31.47 |
| GSMUA_Achr4P30820_001 | Banana | nucleus | 29.11 | 31.37 |
| KRH19153 | Soybean | nucleus | 31.85 | 29.62 |
| KRH02716 | Soybean | nucleus | 32.53 | 29.5 |
| KRH50773 | Soybean | nucleus | 15.41 | 28.48 |
| KRH12382 | Soybean | nucleus | 29.45 | 27.3 |
| PGSC0003DMT400000761 | Potato | nucleus | 26.71 | 27.18 |
| Solyc12g008830.1.1 | Tomato | nucleus | 26.37 | 26.28 |
| KRH37384 | Soybean | nucleus | 29.11 | 25.22 |
| Os02t0220400-01 | Rice | nucleus | 27.4 | 22.66 |
| TraesCS6A01G185900.1 | Wheat | cytosol | 26.37 | 22.51 |
| TraesCS6D01G173000.1 | Wheat | cytosol | 26.37 | 22.51 |
| KRH30068 | Soybean | plastid | 11.99 | 22.44 |
| HORVU6Hr1G039720.2 | Barley | cytosol | 26.03 | 22.09 |
| TraesCS6B01G214900.1 | Wheat | cytosol | 25.68 | 21.93 |
| Zm00001d016361_P001 | Maize | nucleus | 27.4 | 21.62 |
| Zm00001d046354_P001 | Maize | nucleus | 27.05 | 21.35 |
| TraesCS7A01G363100.1 | Wheat | nucleus | 26.03 | 21.35 |
| TraesCS7D01G359900.1 | Wheat | nucleus | 26.03 | 21.17 |
| HORVU7Hr1G086810.1 | Barley | nucleus | 26.03 | 21.11 |
| TraesCS7B01G264800.1 | Wheat | nucleus | 25.68 | 20.78 |
| KRH43324 | Soybean | nucleus | 9.59 | 20.59 |
| EER88552 | Sorghum | nucleus | 27.05 | 20.47 |
| Os06t0571800-02 | Rice | nucleus | 24.32 | 20.46 |
| Bra001644.1-P | Field mustard | nucleus | 9.93 | 19.86 |
| KXG29816 | Sorghum | nucleus | 26.03 | 19.64 |
| KRH28681 | Soybean | nucleus | 16.44 | 19.59 |
| KRH69915 | Soybean | nucleus | 16.44 | 19.05 |
| KRH08269 | Soybean | nucleus | 16.1 | 18.73 |
Protein Annotations
| EntrezGene:102659929 | MapMan:15.5.1.3 | Gene3D:3.30.50.10 | EMBL:ACUP02002171 | EnsemblPlantsGene:GLYMA_04G051300 | GO:GO:0000977 |
| GO:GO:0001085 | GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005667 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006366 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0045944 | GO:GO:0046872 | InterPro:IPR000679 | InterPro:IPR013088 | UniProt:K7KI74 | EnsemblPlants:KRH61505 |
| ProteinID:KRH61505 | ProteinID:KRH61505.1 | PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 |
| PANTHER:PTHR10071:SF226 | SMART:SM00401 | SUPFAM:SSF57716 | UniParc:UPI0002948E60 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:4162013..4163673
Molecular Weight (calculated)
32520.5 Da
IEP (calculated)
9.098
GRAVY (calculated)
-0.627
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSVSLNPNP PCPTIQDQSQ LFISANNHES TSLSCCTFFH ILDQSQTKDI RDLRHGHQQD GKLVFHIGPS NNNNQVCNSS SVKLQPKPVK ADSSSECGHH
101: NVSLYKIEDE ENKRDHDYEK WMSSTARLTR KMMRLPSTSS DLATKKALNN ITRVCADCNT TSTPLWRSGP NGPKSLCNAC GIRQRKARRA MAEAVNGFAP
201: SVNSSSTKIR VHHKEKKSRT NHFARFRLKC KLATTSTAEG TSQQENVKID LNDFGLSLRD SSALKQQVFP IMDEVAQAAM LLMDLSCGFV YC
101: NVSLYKIEDE ENKRDHDYEK WMSSTARLTR KMMRLPSTSS DLATKKALNN ITRVCADCNT TSTPLWRSGP NGPKSLCNAC GIRQRKARRA MAEAVNGFAP
201: SVNSSSTKIR VHHKEKKSRT NHFARFRLKC KLATTSTAEG TSQQENVKID LNDFGLSLRD SSALKQQVFP IMDEVAQAAM LLMDLSCGFV YC
001: MSMTEETKTT KLESAGDSSD VDNGNCSSSG SGGDTKKTCV DCGTSRTPLW RGGPAGPKSL CNACGIKSRK KRQAALGIRQ DDIKIKSKSN NNLGLESRNV
101: KTGKGEPVNV KIAKCEPGIV KIAKGEPGNV KNKIKRDPEN SSSSNNNKKN VKRVGRFLDF GFKVPAMKRS AVEKKRLWRK LGEEERAAVL LMALSCG
101: KTGKGEPVNV KIAKCEPGIV KIAKGEPGNV KNKIKRDPEN SSSSNNNKKN VKRVGRFLDF GFKVPAMKRS AVEKKRLWRK LGEEERAAVL LMALSCG
Arabidopsis Description
GATA type zinc finger transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q8GW81]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.