Factsheet for GSMUA_Achr2P15750_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	mitochondrion	61.65	41.0
GSMUA_Achr7P09030_001	Banana	nucleus	43.61	37.18
GSMUA_Achr4P30820_001	Banana	nucleus	71.43	35.06
GSMUA_Achr2P16730_001	Banana	nucleus	51.88	33.17
GSMUA_Achr3P00700_001	Banana	nucleus	23.31	25.0
GSMUA_Achr7P03800_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	25.56	23.94
GSMUA_Achr8P24880_001	Banana	nucleus	35.34	21.56
GSMUA_Achr1P26550_001	Banana	nucleus	22.56	21.13
Solyc07g038160.2.1	Tomato	nucleus	41.35	20.68
PGSC0003DMT400000761	Potato	nucleus	44.36	20.56
Bra001644.1-P	Field mustard	nucleus	22.56	20.55
VIT_11s0016g02210.t01	Wine grape	nucleus, plastid	47.37	20.39
Solyc12g008830.1.1	Tomato	nucleus	43.61	19.8
PGSC0003DMT400011449	Potato	nucleus	42.11	19.58
GSMUA_Achr8P33850_001	Banana	nucleus	21.8	19.46
VIT_04s0008g01290.t01	Wine grape	plastid	44.36	19.28
GSMUA_Achr1P14780_001	Banana	nucleus	18.05	19.05
KRH61505	Soybean	nucleus	36.84	16.78
KRH15535	Soybean	nucleus	35.34	15.36
KRH05458	Soybean	nucleus	34.59	15.03
GSMUA_Achr11P...	Banana	plastid	11.28	12.71
GSMUA_Achr3P31070_001	Banana	cytosol, nucleus, plastid	17.29	10.9
GSMUA_Achr7P25620_001	Banana	nucleus	18.05	10.3
GSMUA_Achr6P27250_001	Banana	cytosol, extracellular, nucleus	15.79	9.05

Protein Annotations

EnsemblPlants:GSMUA_Achr2P15750_001	EnsemblPlants:GSMUA_Achr2T15750_001	EnsemblPlantsGene:GSMUA_Achr2G15750_001	GO:GO:0003674	GO:GO:0003700	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058
GO:GO:0009987	ncoils:Coil	PANTHER:PTHR10071	PANTHER:PTHR10071:SF191	SEG:seg	UniParc:UPI000296D3C0
UniProt:M0S8B6	MapMan:35.2	:	:	:	:

Description

Putative GATA transcription factor 22 [Source:GMGC_GENE;Acc:GSMUA_Achr2G15750_001]

Coordinates

chr2:+:16913302..16914060

Molecular Weight (calculated)

14113.4 Da

IEP (calculated)

10.776

GRAVY (calculated)

-0.113

Length

133 amino acids

Sequence
(BLAST)

001: MVSSESAATA TQPRLLCGGV GLAAPRQSLC NACGIRQRKA RRAMAAAAAL NGGLIPATAP AKVRKEKKLD IDRTLPFKKR CKVDASSATA KKLCFDDVQL
101: SSNKNTAIQK VFPQEERDAA ILLMALSCGL IRS

Best Arabidopsis Sequence Match ( AT4G26150.1 )
(BLAST)

001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG

Arabidopsis Description

GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.