Factsheet for GSMUA_Achr10P27510_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P15750_001	Banana	plastid	41.0	61.65
GSMUA_Achr7P09030_001	Banana	nucleus	41.0	52.56
GSMUA_Achr4P30820_001	Banana	nucleus	62.5	46.13
GSMUA_Achr2P16730_001	Banana	nucleus	45.5	43.75
GSMUA_Achr3P00700_001	Banana	nucleus	23.0	37.1
GSMUA_Achr8P24880_001	Banana	nucleus	36.5	33.49
GSMUA_Achr1P26550_001	Banana	nucleus	23.5	33.1
GSMUA_Achr7P03800_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	23.5	33.1
GSMUA_Achr1P14780_001	Banana	nucleus	20.5	32.54
GSMUA_Achr8P33850_001	Banana	nucleus	23.5	31.54
VIT_11s0016g02210.t01	Wine grape	nucleus, plastid	47.5	30.74
VIT_04s0008g01290.t01	Wine grape	plastid	46.0	30.07
Solyc07g038160.2.1	Tomato	nucleus	39.0	29.32
PGSC0003DMT400000761	Potato	nucleus	41.5	28.92
Solyc12g008830.1.1	Tomato	nucleus	41.5	28.33
PGSC0003DMT400011449	Potato	nucleus	39.0	27.27
KRH61505	Soybean	nucleus	37.5	25.68
GSMUA_Achr11P...	Banana	plastid	15.0	25.42
KRH15535	Soybean	nucleus	37.5	24.51
Bra001644.1-P	Field mustard	nucleus	17.5	23.97
KRH05458	Soybean	nucleus	35.0	22.88
GSMUA_Achr3P31070_001	Banana	cytosol, nucleus, plastid	22.0	20.85
GSMUA_Achr7P25620_001	Banana	nucleus	23.5	20.17
GSMUA_Achr6P27250_001	Banana	cytosol, extracellular, nucleus	22.0	18.97

Protein Annotations

MapMan:15.5.1.3	Gene3D:3.30.50.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr10G27510_001	EnsemblPlants:GSMUA_Achr10P27510_001
EnsemblPlants:GSMUA_Achr10T27510_001	InterPro:IPR000679	InterPro:IPR013088	UniProt:M0RLX5	PFAM:PF00320	ScanProsite:PS00344
PFscan:PS50114	PANTHER:PTHR10071	PANTHER:PTHR10071:SF226	SMART:SM00401	SUPFAM:SSF57716	UniParc:UPI000295E9C3
InterPro:Znf_GATA	InterPro:Znf_NHR/GATA	SEG:seg	:	:	:

Description

Putative GATA transcription factor 22 [Source:GMGC_GENE;Acc:GSMUA_Achr10G27510_001]

Coordinates

chr10:+:30646111..30646821

Molecular Weight (calculated)

21544.8 Da

IEP (calculated)

11.670

GRAVY (calculated)

-0.598

Length

200 amino acids

Sequence
(BLAST)

001: MSSKMRFMRK MMNSSHIVVS KQPRGSMRIT PDDQSRSHRL GYSGSNRSNN SPSGIIRVCS DCNTTKTPLW RSGPRGPKSL CNACGIRQSK ARRAMAAAAP
101: NGGLIIPATS PAKAPRQEKI DIDRTLPFKK RCKIDTASSS SSSSSSSTTT TTTASSSRKH CFGNVTSSSN KSSAIQRVFP QEERDAAILL MGLSCGLIRS

Best Arabidopsis Sequence Match ( AT4G26150.1 )
(BLAST)

001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG

Arabidopsis Description

GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.