Factsheet for GSMUA_Achr2P16730_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P09030_001	Banana	nucleus	46.15	61.54
GSMUA_Achr2P15750_001	Banana	plastid	33.17	51.88
GSMUA_Achr10P...	Banana	mitochondrion	43.75	45.5
GSMUA_Achr3P00700_001	Banana	nucleus	22.12	37.1
GSMUA_Achr4P30820_001	Banana	nucleus	45.67	35.06
GSMUA_Achr1P14780_001	Banana	nucleus	20.19	33.33
GSMUA_Achr7P03800_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	22.6	33.1
GSMUA_Achr8P24880_001	Banana	nucleus	34.62	33.03
GSMUA_Achr8P33850_001	Banana	nucleus	22.6	31.54
GSMUA_Achr1P26550_001	Banana	nucleus	21.15	30.99
HORVU6Hr1G039720.2	Barley	cytosol	43.75	26.45
GSMUA_Achr11P...	Banana	plastid	14.9	26.27
TraesCS6D01G173000.1	Wheat	cytosol	42.31	25.73
TraesCS6A01G185900.1	Wheat	cytosol	42.31	25.73
Zm00001d016361_P001	Maize	nucleus	44.23	24.86
TraesCS6B01G214900.1	Wheat	cytosol	40.87	24.85
Os02t0220400-01	Rice	nucleus	41.83	24.65
Zm00001d046354_P001	Maize	nucleus	43.27	24.32
TraesCS7A01G363100.1	Wheat	nucleus	40.87	23.88
TraesCS7D01G359900.1	Wheat	nucleus	40.87	23.68
TraesCS7B01G264800.1	Wheat	nucleus	40.87	23.55
KXG29816	Sorghum	nucleus	43.75	23.51
EER88552	Sorghum	nucleus	43.27	23.32
HORVU7Hr1G086810.1	Barley	nucleus	39.9	23.06
Os06t0571800-02	Rice	nucleus	34.13	20.46
GSMUA_Achr3P31070_001	Banana	cytosol, nucleus, plastid	19.71	19.43
GSMUA_Achr7P25620_001	Banana	nucleus	20.19	18.03
GSMUA_Achr6P27250_001	Banana	cytosol, extracellular, nucleus	19.71	17.67

Protein Annotations

MapMan:15.5.1.3	Gene3D:3.30.50.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr2G16730_001	EnsemblPlants:GSMUA_Achr2P16730_001
EnsemblPlants:GSMUA_Achr2T16730_001	InterPro:IPR000679	InterPro:IPR013088	UniProt:M0S8L4	PFAM:PF00320	ScanProsite:PS00344
PFscan:PS50114	PANTHER:PTHR10071	PANTHER:PTHR10071:SF226	SMART:SM00401	SUPFAM:SSF57716	UniParc:UPI000295E5B0
InterPro:Znf_GATA	InterPro:Znf_NHR/GATA	SEG:seg	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G16730_001]

Coordinates

chr2:+:17513872..17514595

Molecular Weight (calculated)

23314.1 Da

IEP (calculated)

10.370

GRAVY (calculated)

-0.713

Length

208 amino acids

Sequence
(BLAST)

001: MLATNLWQTV DQSSDHWISR PTRDQDIGKT IELNWCKDEE RHQWMSSEMR IMKKTTSSED GTPRGCRQTN CSINPPADIT RVCSICKTTK TPLWRGGPRG
101: PKSLCNACGI RQRKARRAME AAARGGGGLI RSDAPTKIRK EKKPNMRRIL PFKKRCKITT ASTSQKQLGV EDVEIGLSSN SAFYEVFPQD ERDAATLLMA
201: LSCGLIRG

Best Arabidopsis Sequence Match ( AT4G26150.1 )
(BLAST)

001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG

Arabidopsis Description

GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.