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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G173000.1 Wheat cytosol 93.86 93.86
TraesCS6A01G185900.1 Wheat cytosol 92.69 92.69
HORVU6Hr1G039720.2 Barley cytosol 85.09 84.59
Os02t0220400-01 Rice nucleus 63.74 61.76
GSMUA_Achr7P09030_001 Banana nucleus 23.98 52.56
Zm00001d016361_P001 Maize nucleus 55.85 51.62
KXG29816 Sorghum nucleus 57.6 50.9
TraesCS7B01G264800.1 Wheat nucleus 50.29 47.65
GSMUA_Achr2P16730_001 Banana nucleus 24.85 40.87
VIT_04s0008g01290.t01 Wine grape plastid 30.7 34.31
VIT_11s0016g02210.t01 Wine grape nucleus, plastid 30.41 33.66
KRH02716 Soybean nucleus 27.78 29.5
Solyc07g038160.2.1 Tomato nucleus 22.51 28.95
Bra035633.1-P Field mustard nucleus 25.44 28.9
KRH19153 Soybean nucleus 26.02 28.34
PGSC0003DMT400011449 Potato nucleus 22.81 27.27
AT4G26150.1 Thale cress cytosol 27.19 26.42
KRH15535 Soybean nucleus 23.39 26.14
PGSC0003DMT400000761 Potato nucleus 21.93 26.13
TraesCS3B01G603900.1 Wheat nucleus 13.74 26.11
KRH61505 Soybean nucleus 21.93 25.68
KRH05458 Soybean nucleus 22.81 25.49
TraesCS5B01G508800.1 Wheat nucleus 12.28 25.15
Solyc12g008830.1.1 Tomato nucleus 21.34 24.91
TraesCS1B01G126600.1 Wheat cytosol 10.53 24.66
KRH12382 Soybean nucleus 22.51 24.44
Bra026461.1-P Field mustard nucleus 25.73 24.44
CDX94365 Canola nucleus 25.44 24.17
CDX89358 Canola nucleus 25.44 24.17
CDY20709 Canola nucleus 27.78 24.11
CDY67979 Canola nucleus 27.19 23.72
Bra002788.1-P Field mustard nucleus 26.61 23.51
CDY32755 Canola nucleus 26.61 23.51
CDY42753 Canola nucleus 25.44 23.51
CDY42752 Canola nucleus 25.44 23.51
CDY32891 Canola nucleus 26.32 23.2
CDY67546 Canola nucleus 25.15 22.87
CDX88593 Canola nucleus 23.68 22.82
KRH37384 Soybean nucleus 22.22 22.55
AT5G56860.1 Thale cress nucleus 26.02 22.36
Bra019118.1-P Field mustard nucleus 25.15 22.16
Bra006851.1-P Field mustard nucleus, plastid 24.56 21.88
CDY65439 Canola nucleus 24.56 21.88
TraesCS3B01G269000.1 Wheat cytosol, extracellular, nucleus 13.74 20.98
Bra001644.1-P Field mustard nucleus 8.48 19.86
TraesCS1B01G448200.1 Wheat plastid 12.57 19.82
Protein Annotations
MapMan:15.5.1.3Gene3D:3.30.50.10GO:GO:0000003GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0006139GO:GO:0006355GO:GO:0007275GO:GO:0008150GO:GO:0008152
GO:GO:0008270GO:GO:0009058GO:GO:0009416GO:GO:0009628GO:GO:0009646GO:GO:0009658
GO:GO:0009719GO:GO:0009735GO:GO:0009739GO:GO:0009791GO:GO:0009908GO:GO:0009909
GO:GO:0009987GO:GO:0016043GO:GO:0043565GO:GO:0099402GO:GO:1901698InterPro:IPR000679
InterPro:IPR013088PFAM:PF00320ScanProsite:PS00344PFscan:PS50114PANTHER:PTHR10071PANTHER:PTHR10071:SF287
SMART:SM00401SUPFAM:SSF57716EnsemblPlantsGene:TraesCS6B01G214900EnsemblPlants:TraesCS6B01G214900.1InterPro:Znf_GATAInterPro:Znf_NHR/GATA
TIGR:cd00202SEG:seg::::
Description
No Description!
Coordinates
chr6B:-:290627795..290629335
Molecular Weight (calculated)
35738.4 Da
IEP (calculated)
8.414
GRAVY (calculated)
-0.456
Length
342 amino acids
Sequence
(BLAST)
001: MTTIYMSQLS TLPLMDGDQD QGHFQAFHLP KDPPILFPFM IDNPVEHQGQ GYGDQHSRXX XXXXXXXXFN DHMMMSGGSA DVFATCSPFG PTIQSIGSDM
101: IQRSSYNSYD FEATHAGDGS TSQWASAKPP VKMRIMKKAP TNDHQGGTAR KPRRRAQAHQ GDESQHLQHP MGVIRVCSDC NTSNTPLWRS GPCGPKSLCN
201: ACGIRQRKAR RAMAAAAATA ATNDGVASAS SGGVAVGAMQ ASDASQAVKA TKKEKRAADL DRSLPFKKRC KMVDHPTVTT TKAVAVDATL KDQDHVVAED
301: GAMVERLSKA DPPAAFTHAF MRDEITDAAM LLMTLSCGLV RS
Best Arabidopsis Sequence Match ( AT4G26150.1 )
(BLAST)
001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
Arabidopsis Description
GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.