Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6D01G173000.1 | Wheat | cytosol | 93.86 | 93.86 |
TraesCS6A01G185900.1 | Wheat | cytosol | 92.69 | 92.69 |
HORVU6Hr1G039720.2 | Barley | cytosol | 85.09 | 84.59 |
Os02t0220400-01 | Rice | nucleus | 63.74 | 61.76 |
GSMUA_Achr7P09030_001 | Banana | nucleus | 23.98 | 52.56 |
Zm00001d016361_P001 | Maize | nucleus | 55.85 | 51.62 |
KXG29816 | Sorghum | nucleus | 57.6 | 50.9 |
TraesCS7B01G264800.1 | Wheat | nucleus | 50.29 | 47.65 |
GSMUA_Achr2P16730_001 | Banana | nucleus | 24.85 | 40.87 |
VIT_04s0008g01290.t01 | Wine grape | plastid | 30.7 | 34.31 |
VIT_11s0016g02210.t01 | Wine grape | nucleus, plastid | 30.41 | 33.66 |
KRH02716 | Soybean | nucleus | 27.78 | 29.5 |
Solyc07g038160.2.1 | Tomato | nucleus | 22.51 | 28.95 |
Bra035633.1-P | Field mustard | nucleus | 25.44 | 28.9 |
KRH19153 | Soybean | nucleus | 26.02 | 28.34 |
PGSC0003DMT400011449 | Potato | nucleus | 22.81 | 27.27 |
AT4G26150.1 | Thale cress | cytosol | 27.19 | 26.42 |
KRH15535 | Soybean | nucleus | 23.39 | 26.14 |
PGSC0003DMT400000761 | Potato | nucleus | 21.93 | 26.13 |
TraesCS3B01G603900.1 | Wheat | nucleus | 13.74 | 26.11 |
KRH61505 | Soybean | nucleus | 21.93 | 25.68 |
KRH05458 | Soybean | nucleus | 22.81 | 25.49 |
TraesCS5B01G508800.1 | Wheat | nucleus | 12.28 | 25.15 |
Solyc12g008830.1.1 | Tomato | nucleus | 21.34 | 24.91 |
TraesCS1B01G126600.1 | Wheat | cytosol | 10.53 | 24.66 |
KRH12382 | Soybean | nucleus | 22.51 | 24.44 |
Bra026461.1-P | Field mustard | nucleus | 25.73 | 24.44 |
CDX94365 | Canola | nucleus | 25.44 | 24.17 |
CDX89358 | Canola | nucleus | 25.44 | 24.17 |
CDY20709 | Canola | nucleus | 27.78 | 24.11 |
CDY67979 | Canola | nucleus | 27.19 | 23.72 |
Bra002788.1-P | Field mustard | nucleus | 26.61 | 23.51 |
CDY32755 | Canola | nucleus | 26.61 | 23.51 |
CDY42753 | Canola | nucleus | 25.44 | 23.51 |
CDY42752 | Canola | nucleus | 25.44 | 23.51 |
CDY32891 | Canola | nucleus | 26.32 | 23.2 |
CDY67546 | Canola | nucleus | 25.15 | 22.87 |
CDX88593 | Canola | nucleus | 23.68 | 22.82 |
KRH37384 | Soybean | nucleus | 22.22 | 22.55 |
AT5G56860.1 | Thale cress | nucleus | 26.02 | 22.36 |
Bra019118.1-P | Field mustard | nucleus | 25.15 | 22.16 |
Bra006851.1-P | Field mustard | nucleus, plastid | 24.56 | 21.88 |
CDY65439 | Canola | nucleus | 24.56 | 21.88 |
TraesCS3B01G269000.1 | Wheat | cytosol, extracellular, nucleus | 13.74 | 20.98 |
Bra001644.1-P | Field mustard | nucleus | 8.48 | 19.86 |
TraesCS1B01G448200.1 | Wheat | plastid | 12.57 | 19.82 |
Protein Annotations
MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009646 | GO:GO:0009658 |
GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009739 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 |
GO:GO:0009987 | GO:GO:0016043 | GO:GO:0043565 | GO:GO:0099402 | GO:GO:1901698 | InterPro:IPR000679 |
InterPro:IPR013088 | PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF287 |
SMART:SM00401 | SUPFAM:SSF57716 | EnsemblPlantsGene:TraesCS6B01G214900 | EnsemblPlants:TraesCS6B01G214900.1 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA |
TIGR:cd00202 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:290627795..290629335
Molecular Weight (calculated)
35738.4 Da
IEP (calculated)
8.414
GRAVY (calculated)
-0.456
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTIYMSQLS TLPLMDGDQD QGHFQAFHLP KDPPILFPFM IDNPVEHQGQ GYGDQHSRXX XXXXXXXXFN DHMMMSGGSA DVFATCSPFG PTIQSIGSDM
101: IQRSSYNSYD FEATHAGDGS TSQWASAKPP VKMRIMKKAP TNDHQGGTAR KPRRRAQAHQ GDESQHLQHP MGVIRVCSDC NTSNTPLWRS GPCGPKSLCN
201: ACGIRQRKAR RAMAAAAATA ATNDGVASAS SGGVAVGAMQ ASDASQAVKA TKKEKRAADL DRSLPFKKRC KMVDHPTVTT TKAVAVDATL KDQDHVVAED
301: GAMVERLSKA DPPAAFTHAF MRDEITDAAM LLMTLSCGLV RS
101: IQRSSYNSYD FEATHAGDGS TSQWASAKPP VKMRIMKKAP TNDHQGGTAR KPRRRAQAHQ GDESQHLQHP MGVIRVCSDC NTSNTPLWRS GPCGPKSLCN
201: ACGIRQRKAR RAMAAAAATA ATNDGVASAS SGGVAVGAMQ ASDASQAVKA TKKEKRAADL DRSLPFKKRC KMVDHPTVTT TKAVAVDATL KDQDHVVAED
301: GAMVERLSKA DPPAAFTHAF MRDEITDAAM LLMTLSCGLV RS
001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
Arabidopsis Description
GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.