Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42752 | Canola | nucleus | 93.62 | 95.14 |
| CDY42753 | Canola | nucleus | 93.35 | 94.86 |
| Bra019118.1-P | Field mustard | nucleus | 94.15 | 91.24 |
| CDX94365 | Canola | nucleus | 67.29 | 70.28 |
| AT4G26150.1 | Thale cress | cytosol | 65.43 | 69.89 |
| CDX89358 | Canola | nucleus | 65.69 | 68.61 |
| CDY67979 | Canola | nucleus | 52.13 | 50.0 |
| CDY20709 | Canola | nucleus | 51.86 | 49.49 |
| CDY32891 | Canola | nucleus | 51.06 | 49.48 |
| CDY32755 | Canola | nucleus | 50.27 | 48.84 |
| CDY65439 | Canola | nucleus | 49.47 | 48.44 |
| CDX88593 | Canola | nucleus | 43.62 | 46.2 |
| GSMUA_Achr8P24880_001 | Banana | nucleus | 22.07 | 38.07 |
| CDY25008 | Canola | nucleus | 10.11 | 38.0 |
| CDX87024 | Canola | nucleus | 10.37 | 37.86 |
| CDX85400 | Canola | nucleus | 12.5 | 37.01 |
| CDX86241 | Canola | nucleus | 12.23 | 36.22 |
| KRH19153 | Soybean | nucleus | 30.05 | 35.99 |
| CDY05639 | Canola | nucleus | 12.5 | 35.88 |
| KRH12382 | Soybean | nucleus | 28.99 | 34.6 |
| KRH02716 | Soybean | nucleus | 29.52 | 34.47 |
| CDY33918 | Canola | nucleus | 12.5 | 33.33 |
| CDY68751 | Canola | cytosol, mitochondrion | 8.78 | 32.67 |
| CDY34933 | Canola | nucleus | 11.7 | 31.43 |
| KRH37384 | Soybean | nucleus | 27.66 | 30.86 |
| CDX90545 | Canola | nucleus | 11.97 | 30.61 |
| CDY34429 | Canola | cytosol | 12.23 | 30.07 |
| CDY34981 | Canola | nucleus | 12.77 | 28.07 |
| TraesCS7D01G359900.1 | Wheat | nucleus | 26.06 | 27.3 |
| TraesCS7A01G363100.1 | Wheat | nucleus | 25.8 | 27.25 |
| CDY52723 | Canola | nucleus | 13.03 | 27.22 |
| CDX92103 | Canola | nucleus | 11.97 | 27.11 |
| HORVU7Hr1G086810.1 | Barley | nucleus | 25.8 | 26.94 |
| CDX82388 | Canola | nucleus | 12.23 | 26.44 |
| TraesCS6A01G185900.1 | Wheat | cytosol | 23.94 | 26.32 |
| TraesCS7B01G264800.1 | Wheat | nucleus | 25.27 | 26.32 |
| CDY32214 | Canola | nucleus | 12.5 | 26.26 |
| HORVU6Hr1G039720.2 | Barley | cytosol | 23.94 | 26.16 |
| TraesCS6D01G173000.1 | Wheat | cytosol | 23.67 | 26.02 |
| CDY09717 | Canola | nucleus | 12.23 | 25.99 |
| Os02t0220400-01 | Rice | nucleus | 24.2 | 25.78 |
| CDX75893 | Canola | nucleus | 12.5 | 25.68 |
| Zm00001d046354_P001 | Maize | nucleus | 25.27 | 25.68 |
| CDX95897 | Canola | nucleus | 11.17 | 25.61 |
| EER88552 | Sorghum | nucleus | 26.06 | 25.39 |
| CDX80603 | Canola | nucleus | 9.84 | 25.17 |
| TraesCS6B01G214900.1 | Wheat | cytosol | 22.87 | 25.15 |
| Zm00001d016361_P001 | Maize | nucleus | 24.73 | 25.14 |
| Os06t0571800-02 | Rice | nucleus | 22.87 | 24.78 |
| KXG29816 | Sorghum | nucleus | 24.47 | 23.77 |
| CDY68627 | Canola | nucleus | 13.03 | 22.07 |
| CDY53079 | Canola | cytosol | 11.97 | 21.74 |
| CDY69687 | Canola | nucleus | 10.9 | 21.69 |
| CDX69237 | Canola | nucleus | 12.77 | 21.52 |
| CDY60289 | Canola | nucleus | 11.44 | 21.29 |
| CDY70754 | Canola | nucleus | 12.23 | 20.63 |
| CDY13040 | Canola | cytosol | 10.9 | 20.6 |
| CDY51221 | Canola | nucleus | 10.9 | 20.4 |
| CDY24779 | Canola | nucleus | 11.44 | 20.19 |
| CDX72587 | Canola | cytosol | 11.97 | 19.82 |
| CDY72649 | Canola | nucleus | 10.37 | 19.5 |
| CDY45238 | Canola | nucleus | 10.9 | 17.37 |
| CDX77958 | Canola | nucleus | 12.23 | 17.29 |
| CDY30768 | Canola | nucleus | 10.37 | 17.11 |
| CDY28986 | Canola | cytosol | 12.23 | 16.79 |
| CDX90680 | Canola | nucleus | 12.23 | 16.55 |
| CDX73777 | Canola | nucleus | 12.5 | 16.21 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078JPA0 | UniProt:A0A078JPA0 | EnsemblPlants:CDY67546 | ProteinID:CDY67546 |
| ProteinID:CDY67546.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00064418001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF191 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0004EE9DBD | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
BnaAnng24640DBnaAnng24640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPA0]
Coordinates
chrLK036236:+:768..2308
Molecular Weight (calculated)
42017.3 Da
IEP (calculated)
9.985
GRAVY (calculated)
-0.835
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNFRYTID LNEDHQNHQP FFSSFGPSIH QSRYHQQHLY HHQAPSNPTS SSSSLASPSL SYLPFLINSH QDQVHVGYNN HTFHGFLDPH ISHPLETKKF
101: VYDGGSSSSD QMMPEKETRL KLTIRKNDNH HDQTDLPQYP TKGETESNSL KWMSSKVRFM KRKTMITPTD NNKQYVKNDQ SLNVSNLEED HLKRISKNQY
201: NMIANKNGYN GSNNCVTRIC SDCNTTKTPL WRSGPRGPKS LCNACGIRQR KARRAAMAAS GATTTSDLSP PLLKKKIQNK NKRSNKVGSL SSPLASKVHK
301: YKSMTTSGAG AITGDLETQG KSTMSSSSTS TSSNKCYFDE LAIILSKSSA YQQVFPQDEK EAAILLMALS YGMLHG
101: VYDGGSSSSD QMMPEKETRL KLTIRKNDNH HDQTDLPQYP TKGETESNSL KWMSSKVRFM KRKTMITPTD NNKQYVKNDQ SLNVSNLEED HLKRISKNQY
201: NMIANKNGYN GSNNCVTRIC SDCNTTKTPL WRSGPRGPKS LCNACGIRQR KARRAAMAAS GATTTSDLSP PLLKKKIQNK NKRSNKVGSL SSPLASKVHK
301: YKSMTTSGAG AITGDLETQG KSTMSSSSTS TSSNKCYFDE LAIILSKSSA YQQVFPQDEK EAAILLMALS YGMLHG
001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
Arabidopsis Description
GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.