Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033533.1-P | Field mustard | nucleus | 98.88 | 98.88 |
| CDY34429 | Canola | cytosol | 83.24 | 97.39 |
| CDX90545 | Canola | nucleus | 68.16 | 82.99 |
| CDY09717 | Canola | nucleus | 78.77 | 79.66 |
| AT4G16141.1 | Thale cress | cytosol | 78.77 | 71.57 |
| CDX95897 | Canola | nucleus | 59.78 | 65.24 |
| CDX82388 | Canola | nucleus | 61.45 | 63.22 |
| CDY34981 | Canola | nucleus | 60.34 | 63.16 |
| CDX92103 | Canola | nucleus | 58.1 | 62.65 |
| CDY52723 | Canola | nucleus | 60.34 | 60.0 |
| CDX75893 | Canola | nucleus | 60.34 | 59.02 |
| CDY05639 | Canola | nucleus | 37.99 | 51.91 |
| CDX85400 | Canola | nucleus | 35.2 | 49.61 |
| CDX86241 | Canola | nucleus | 34.64 | 48.82 |
| CDY33918 | Canola | nucleus | 37.99 | 48.23 |
| CDX87024 | Canola | nucleus | 26.26 | 45.63 |
| CDY25008 | Canola | nucleus | 24.02 | 43.0 |
| CDY34933 | Canola | nucleus | 33.52 | 42.86 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 28.49 | 41.13 |
| PGSC0003DMT400011779 | Potato | nucleus | 37.99 | 40.48 |
| Solyc12g099370.1.1 | Tomato | nucleus | 37.99 | 40.48 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 32.4 | 38.93 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 25.7 | 36.51 |
| HORVU5Hr1G116310.1 | Barley | nucleus | 32.96 | 36.42 |
| EER93149 | Sorghum | nucleus | 31.84 | 36.31 |
| KXG32453 | Sorghum | nucleus | 25.14 | 36.0 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 28.49 | 35.92 |
| Os01t0976800-01 | Rice | nucleus | 28.49 | 35.92 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 27.93 | 35.21 |
| Os01t0343300-01 | Rice | nucleus | 25.7 | 35.11 |
| Zm00001d034751_P001 | Maize | nucleus | 31.84 | 34.97 |
| CDY68751 | Canola | cytosol, mitochondrion | 19.55 | 34.65 |
| TraesCS5D01G508800.1 | Wheat | nucleus | 31.28 | 34.57 |
| PGSC0003DMT400060241 | Potato | nucleus | 37.99 | 34.52 |
| Zm00001d037605_P001 | Maize | nucleus | 27.37 | 34.27 |
| TraesCS5B01G508800.1 | Wheat | nucleus | 31.84 | 34.13 |
| Solyc05g054400.2.1 | Tomato | nucleus | 37.43 | 34.01 |
| TraesCS3A01G538400.1 | Wheat | nucleus | 30.73 | 32.74 |
| Zm00001d009193_P001 | Maize | plastid | 25.14 | 32.37 |
| HORVU6Hr1G093630.3 | Barley | mitochondrion | 23.46 | 31.34 |
| TraesCS3D01G544000.1 | Wheat | nucleus | 30.73 | 30.73 |
| CDX80603 | Canola | nucleus | 25.14 | 30.61 |
| TraesCS3B01G603900.1 | Wheat | nucleus | 30.73 | 30.56 |
| KXG21349 | Sorghum | cytosol | 26.26 | 30.13 |
| TraesCS4A01G364700.1 | Wheat | nucleus | 29.61 | 29.28 |
| Zm00001d040775_P001 | Maize | nucleus | 24.02 | 29.25 |
| TraesCS1D01G106100.1 | Wheat | cytosol | 23.46 | 28.77 |
| TraesCS1B01G126600.1 | Wheat | cytosol | 23.46 | 28.77 |
| EES04307 | Sorghum | nucleus | 34.08 | 28.11 |
| Zm00001d011771_P001 | Maize | nucleus | 30.17 | 27.69 |
| TraesCS1A01G097300.1 | Wheat | cytosol | 24.02 | 27.04 |
| Os05t0155400-01 | Rice | mitochondrion, nucleus, vacuole | 26.26 | 24.35 |
| HORVU1Hr1G022710.3 | Barley | plastid | 24.02 | 19.91 |
| CDY13040 | Canola | cytosol | 18.44 | 16.58 |
| CDY72649 | Canola | nucleus | 18.44 | 16.5 |
| CDY60289 | Canola | nucleus | 17.88 | 15.84 |
| CDY53079 | Canola | cytosol | 17.88 | 15.46 |
| CDY51221 | Canola | nucleus | 17.32 | 15.42 |
| CDY69687 | Canola | nucleus | 15.08 | 14.29 |
| CDY68627 | Canola | nucleus | 17.32 | 13.96 |
| CDX69237 | Canola | nucleus | 17.32 | 13.9 |
| CDY24779 | Canola | nucleus | 16.2 | 13.62 |
| CDX89358 | Canola | nucleus | 27.37 | 13.61 |
| CDX94365 | Canola | nucleus | 27.37 | 13.61 |
| CDX88593 | Canola | nucleus | 26.82 | 13.52 |
| CDY70754 | Canola | nucleus | 16.76 | 13.45 |
| CDX72587 | Canola | cytosol | 16.76 | 13.22 |
| CDX77958 | Canola | nucleus | 18.99 | 12.78 |
| CDY30768 | Canola | nucleus | 16.2 | 12.72 |
| CDY45238 | Canola | nucleus | 16.76 | 12.71 |
| CDY42752 | Canola | nucleus | 26.26 | 12.7 |
| CDY42753 | Canola | nucleus | 26.26 | 12.7 |
| CDY67546 | Canola | nucleus | 26.26 | 12.5 |
| CDY32755 | Canola | nucleus | 26.82 | 12.4 |
| CDY32891 | Canola | nucleus | 26.82 | 12.37 |
| CDY67979 | Canola | nucleus | 26.82 | 12.24 |
| CDY65439 | Canola | nucleus | 26.26 | 12.24 |
| CDY20709 | Canola | nucleus | 26.82 | 12.18 |
| CDY28986 | Canola | cytosol | 17.88 | 11.68 |
| CDX73777 | Canola | nucleus | 18.44 | 11.38 |
| CDX90680 | Canola | nucleus | 17.32 | 11.15 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078H489 | UniProt:A0A078H489 | EnsemblPlants:CDY32214 | ProteinID:CDY32214 |
| ProteinID:CDY32214.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00051645001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF242 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0004EE0D7B | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
BnaA01g17700DBnaA01g17700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H489]
Coordinates
chrLK032290:-:30335..31572
Molecular Weight (calculated)
19624.6 Da
IEP (calculated)
10.617
GRAVY (calculated)
-0.864
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMTEETKTT TKLETAGDSS DVESGNCSSS GSGGDTKKTC VDCGTNKTPL WRGGPAGPKS LCNACGIKSR KKRQAALGIR QDDNKKIKNK TNNSLPLDHQ
101: MIKNRKGESG NVKNKIKTTE SENFISRVNK KSLERASRFL DLGFKVPAMK RSVVEKKRLW RKLGEEERAA VLLMTLSCG
101: MIKNRKGESG NVKNKIKTTE SENFISRVNK KSLERASRFL DLGFKVPAMK RSVVEKKRLW RKLGEEERAA VLLMTLSCG
001: MSMTEETKTT KLESAGDSSD VDNGNCSSSG SGGDTKKTCV DCGTSRTPLW RGGPAGPKSL CNACGIKSRK KRQAALGIRQ DDIKIKSKSN NNLGLESRNV
101: KTGKGEPVNV KIAKCEPGIV KIAKGEPGNV KNKIKRDPEN SSSSNNNKKN VKRVGRFLDF GFKVPAMKRS AVEKKRLWRK LGEEERAAVL LMALSCG
101: KTGKGEPVNV KIAKCEPGIV KIAKGEPGNV KNKIKRDPEN SSSSNNNKKN VKRVGRFLDF GFKVPAMKRS AVEKKRLWRK LGEEERAAVL LMALSCG
Arabidopsis Description
GATA type zinc finger transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q8GW81]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.