Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG32453 | Sorghum | nucleus | 76.34 | 80.0 |
| Zm00001d009193_P001 | Maize | plastid | 75.57 | 71.22 |
| Zm00001d040775_P001 | Maize | nucleus | 74.81 | 66.67 |
| TraesCS1D01G106100.1 | Wheat | cytosol | 64.89 | 58.22 |
| TraesCS1B01G126600.1 | Wheat | cytosol | 62.6 | 56.16 |
| TraesCS1A01G097300.1 | Wheat | cytosol | 63.36 | 52.2 |
| KRH68462 | Soybean | cytosol | 29.01 | 47.5 |
| Solyc09g075610.2.1 | Tomato | plastid | 32.06 | 47.19 |
| Os05t0155400-01 | Rice | mitochondrion, nucleus, vacuole | 67.94 | 46.11 |
| Bra036600.1-P | Field mustard | nucleus | 32.06 | 40.78 |
| PGSC0003DMT400081417 | Potato | nucleus | 32.82 | 40.57 |
| CDX87024 | Canola | nucleus | 31.3 | 39.81 |
| CDY25008 | Canola | nucleus | 29.77 | 39.0 |
| HORVU1Hr1G022710.3 | Barley | plastid | 64.12 | 38.89 |
| Bra009926.1-P | Field mustard | cytosol | 22.9 | 37.97 |
| KRG96744 | Soybean | cytosol, mitochondrion, nucleus | 23.66 | 37.35 |
| AT5G26930.1 | Thale cress | cytosol | 32.82 | 35.83 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 32.82 | 34.68 |
| VIT_14s0060g01520.t01 | Wine grape | nucleus | 32.06 | 33.87 |
| Os01t0976800-01 | Rice | nucleus | 34.35 | 31.69 |
| CDX86241 | Canola | nucleus | 30.53 | 31.5 |
| Bra037421.1-P | Field mustard | nucleus | 30.53 | 31.5 |
| Solyc01g100220.2.1 | Tomato | nucleus | 35.11 | 30.87 |
| CDX85400 | Canola | nucleus | 29.77 | 30.71 |
| PGSC0003DMT400063771 | Potato | nucleus | 35.11 | 30.46 |
| PGSC0003DMT400011779 | Potato | nucleus | 38.93 | 30.36 |
| Solyc12g099370.1.1 | Tomato | nucleus | 38.93 | 30.36 |
| VIT_05s0077g01450.t01 | Wine grape | nucleus | 35.11 | 30.07 |
| CDY68751 | Canola | cytosol, mitochondrion | 22.9 | 29.7 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 32.06 | 29.58 |
| CDY34429 | Canola | cytosol | 34.35 | 29.41 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 28.24 | 29.37 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 31.3 | 28.87 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 32.82 | 28.86 |
| CDY05639 | Canola | nucleus | 28.24 | 28.24 |
| AT5G49300.1 | Thale cress | cytosol | 29.77 | 28.06 |
| CDX90545 | Canola | nucleus | 31.3 | 27.89 |
| KRH02314 | Soybean | nucleus | 29.77 | 27.86 |
| Bra040288.1-P | Field mustard | nucleus | 29.01 | 27.34 |
| CDX80603 | Canola | nucleus | 30.53 | 27.21 |
| CDY34933 | Canola | nucleus | 29.01 | 27.14 |
| AT3G06740.1 | Thale cress | nucleus | 30.53 | 26.85 |
| Bra022184.1-P | Field mustard | nucleus | 33.59 | 26.51 |
| CDX92103 | Canola | nucleus | 33.59 | 26.51 |
| AT3G16870.1 | Thale cress | nucleus | 38.17 | 26.32 |
| CDY33918 | Canola | nucleus | 28.24 | 26.24 |
| CDX75893 | Canola | nucleus | 36.64 | 26.23 |
| CDX95897 | Canola | nucleus | 32.82 | 26.22 |
| CDX82388 | Canola | nucleus | 34.35 | 25.86 |
| CDY34981 | Canola | nucleus | 33.59 | 25.73 |
| Bra020650.1-P | Field mustard | nucleus | 27.48 | 25.71 |
| Bra033533.1-P | Field mustard | nucleus | 35.11 | 25.7 |
| CDY32214 | Canola | nucleus | 35.11 | 25.7 |
| Bra021209.1-P | Field mustard | nucleus | 32.82 | 25.15 |
| CDY52723 | Canola | nucleus | 34.35 | 25.0 |
| KRH50773 | Soybean | nucleus | 29.77 | 24.68 |
| Bra012742.1-P | Field mustard | nucleus | 31.3 | 24.55 |
| Solyc05g054400.2.1 | Tomato | nucleus | 35.11 | 23.35 |
| PGSC0003DMT400060241 | Potato | nucleus | 35.11 | 23.35 |
| CDY09717 | Canola | nucleus | 31.3 | 23.16 |
| AT4G16141.1 | Thale cress | cytosol | 33.59 | 22.34 |
| Os01t0662800-00 | Rice | cytosol, extracellular, nucleus | 22.9 | 12.4 |
| Os05t0567900-00 | Rice | cytosol, extracellular, plastid | 22.14 | 11.6 |
| Os02t0220400-01 | Rice | nucleus | 30.53 | 11.33 |
| Os06t0571800-02 | Rice | nucleus | 29.77 | 11.24 |
| Os05t0578900-01 | Rice | nucleus | 23.66 | 11.11 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | EntrezGene:4326489 | ProteinID:BAB93299.1 | ProteinID:BAF04873.1 | ProteinID:BAS71988.1 |
| GO:GO:0000977 | GO:GO:0001085 | GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003682 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005667 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006366 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0045944 | GO:GO:0046872 | InterPro:IPR000679 | InterPro:IPR013088 | EnsemblPlantsGene:Os01g0343300 |
| EnsemblPlants:Os01t0343300-01 | PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF198 |
| UniProt:Q8LQW5 | SMART:SM00401 | SUPFAM:SSF57716 | UniParc:UPI00000A2304 | RefSeq:XP_015621366.1 | InterPro:Znf_GATA |
| InterPro:Znf_NHR/GATA | SEG:seg | : | : | : | : |
Description
GATA TRANSCRIPTION FACTOR 8Zinc finger, NHR/GATA-type domain containing protein. (Os01t0343300-01)
Coordinates
chr1:+:13570702..13573119
Molecular Weight (calculated)
14138.9 Da
IEP (calculated)
9.531
GRAVY (calculated)
-0.607
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSTDRKVVG IGVAEEGRRS CVECRATTTP MWRSGPTGPR SLCNACGIRY RKKRRQDLGL DLNQPQKQEH GEVIPEVKDS NSNSNNCNSG SGNSSSNLQV
101: VPKRRLLMGV EEAALLLMTL SSPSASTLLH G
101: VPKRRLLMGV EEAALLLMTL SSPSASTLLH G
001: MDPRKLLSCS SSYVSVRMKE EKGTIRCCSE CKTTKTPMWR GGPTGPKSLC NACGIRHRKQ RRSELLGIHI IRSHKSLASK KINLLSSSHG GVAVKKRRSL
101: KEEEQAALCL LLLSCSSVLA
101: KEEEQAALCL LLLSCSSVLA
Arabidopsis Description
GATA23GATA transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC59]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.