CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96744	Soybean	cytosol, mitochondrion, nucleus	73.75	71.08
VIT_14s0060g01520.t01	Wine grape	nucleus	78.75	50.81
GSMUA_Achr3P00700_001	Banana	nucleus	58.75	37.9
KRH02314	Soybean	nucleus	65.0	37.14
GSMUA_Achr1P14780_001	Banana	nucleus	57.5	36.51
Os01t0976800-01	Rice	nucleus	63.75	35.92
GSMUA_Achr1P26550_001	Banana	nucleus	60.0	33.8
GSMUA_Achr8P33850_001	Banana	nucleus	62.5	33.56
KRH50773	Soybean	nucleus	65.0	32.91
GSMUA_Achr7P03800_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	55.0	30.99
TraesCS3A01G538400.1	Wheat	nucleus	62.5	29.76
KXG32453	Sorghum	nucleus	46.25	29.6
EER93149	Sorghum	nucleus	57.5	29.3
Os01t0343300-01	Rice	nucleus	47.5	29.01
Zm00001d037605_P001	Maize	nucleus	51.25	28.67
Zm00001d034751_P001	Maize	nucleus	57.5	28.22
TraesCS3D01G544000.1	Wheat	nucleus	62.5	27.93
TraesCS3B01G603900.1	Wheat	nucleus	62.5	27.78
TraesCS5D01G508800.1	Wheat	nucleus	55.0	27.16
HORVU5Hr1G116310.1	Barley	nucleus	55.0	27.16
TraesCS1D01G106100.1	Wheat	cytosol	48.75	26.71
TraesCS1B01G126600.1	Wheat	cytosol	48.75	26.71
Zm00001d009193_P001	Maize	plastid	46.25	26.62
TraesCS5B01G508800.1	Wheat	nucleus	55.0	26.35
KXG21349	Sorghum	cytosol	51.25	26.28
Zm00001d040775_P001	Maize	nucleus	46.25	25.17
TraesCS1A01G097300.1	Wheat	cytosol	48.75	24.53
Zm00001d011771_P001	Maize	nucleus	56.25	23.08
TraesCS4A01G364700.1	Wheat	nucleus	51.25	22.65
EES04307	Sorghum	nucleus	61.25	22.58
HORVU6Hr1G093630.3	Barley	mitochondrion	37.5	22.39
Os05t0155400-01	Rice	mitochondrion, nucleus, vacuole	48.75	20.21
HORVU1Hr1G022710.3	Barley	plastid	50.0	18.52
KRH30068	Soybean	plastid	30.0	15.38
KRH61505	Soybean	nucleus	50.0	13.7
KRH19153	Soybean	nucleus	51.25	13.06
KRH02716	Soybean	nucleus	51.25	12.73
KRH12382	Soybean	nucleus	50.0	12.7
KRH37384	Soybean	nucleus	51.25	12.17
KRH15535	Soybean	nucleus	46.25	12.09
KRH05458	Soybean	nucleus	46.25	12.09
KRH08269	Soybean	nucleus	37.5	11.95
KRH69915	Soybean	nucleus	37.5	11.9
KRH43324	Soybean	nucleus	20.0	11.76
KRH28681	Soybean	nucleus	33.75	11.02

Protein Annotations

EntrezGene:100799175	MapMan:15.5.1.3	Gene3D:3.30.50.10	EMBL:ACUP02002116	EnsemblPlantsGene:GLYMA_03G232900	GO:GO:0000977
GO:GO:0001085	GO:GO:0001228	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003682
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005667	GO:GO:0006139	GO:GO:0006355	GO:GO:0006366	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0045944	GO:GO:0046872	UniProt:I1JR72	InterPro:IPR000679	InterPro:IPR013088	EnsemblPlants:KRH68462
ProteinID:KRH68462	ProteinID:KRH68462.1	PFAM:PF00320	ScanProsite:PS00344	PFscan:PS50114	PANTHER:PTHR10071
PANTHER:PTHR10071:SF242	SMART:SM00401	SUPFAM:SSF57716	UniParc:UPI000233A02A	InterPro:Znf_GATA	InterPro:Znf_NHR/GATA
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:43380023..43380967

Molecular Weight (calculated)

9059.2 Da

IEP (calculated)

9.871

GRAVY (calculated)

-0.589

Length

80 amino acids

Sequence
(BLAST)

1: MMDLNVNEKK KCCADCKTTK TPLWRGGPAG PKTLCNACGI RYRKRRACSR KREEQRWKML GEEEQAAVCL MALSSGFVFA

Best Arabidopsis Sequence Match ( AT5G49300.1 )
(BLAST)

001: MLDHSEKVLL VDSETMKTRA EDMIEQNNTS VNDKKKTCAD CGTSKTPLWR GGPVGPKSLC NACGIRNRKK RRGGTEDNKK LKKSSSGGGN RKFGESLKQS
101: LMDLGIRKRS TVEKQRQKLG EEEQAAVLLM ALSYGSVYA

Arabidopsis Description

GATA16Uncharacterized protein At5g49300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.