Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011771_P001 | Maize | nucleus | 68.66 | 76.41 |
| EER93149 | Sorghum | nucleus | 44.7 | 61.78 |
| KRH68462 | Soybean | cytosol | 22.58 | 61.25 |
| Os01t0976800-01 | Rice | nucleus | 39.63 | 60.56 |
| Solyc09g075610.2.1 | Tomato | plastid | 21.66 | 52.81 |
| KRG96744 | Soybean | cytosol, mitochondrion, nucleus | 19.35 | 50.6 |
| PGSC0003DMT400081417 | Potato | nucleus | 23.96 | 49.06 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 27.19 | 47.58 |
| VIT_14s0060g01520.t01 | Wine grape | nucleus | 26.73 | 46.77 |
| CDX85400 | Canola | nucleus | 26.73 | 45.67 |
| Bra009926.1-P | Field mustard | cytosol | 16.13 | 44.3 |
| Bra020650.1-P | Field mustard | nucleus | 28.57 | 44.29 |
| CDY05639 | Canola | nucleus | 26.73 | 44.27 |
| Bra037421.1-P | Field mustard | nucleus | 25.81 | 44.09 |
| CDX86241 | Canola | nucleus | 25.81 | 44.09 |
| CDY25008 | Canola | nucleus | 20.28 | 44.0 |
| CDY33918 | Canola | nucleus | 28.57 | 43.97 |
| VIT_05s0077g01450.t01 | Wine grape | nucleus | 30.88 | 43.79 |
| CDX87024 | Canola | nucleus | 20.74 | 43.69 |
| Bra040288.1-P | Field mustard | nucleus | 27.19 | 42.45 |
| KRH02314 | Soybean | nucleus | 27.19 | 42.14 |
| CDY34933 | Canola | nucleus | 27.19 | 42.14 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 28.57 | 41.61 |
| AT3G06740.1 | Thale cress | nucleus | 28.57 | 41.61 |
| AT5G49300.1 | Thale cress | cytosol | 26.27 | 41.01 |
| CDX90545 | Canola | nucleus | 27.65 | 40.82 |
| Bra036600.1-P | Field mustard | nucleus | 19.35 | 40.78 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 26.27 | 40.14 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 25.81 | 39.44 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 22.58 | 38.89 |
| CDY34429 | Canola | cytosol | 27.19 | 38.56 |
| PGSC0003DMT400063771 | Potato | nucleus | 26.73 | 38.41 |
| Bra012742.1-P | Field mustard | nucleus | 29.49 | 38.32 |
| Solyc01g100220.2.1 | Tomato | nucleus | 26.27 | 38.26 |
| KRH50773 | Soybean | nucleus | 27.65 | 37.97 |
| AT5G26930.1 | Thale cress | cytosol | 20.74 | 37.5 |
| CDY09717 | Canola | nucleus | 29.95 | 36.72 |
| Solyc12g099370.1.1 | Tomato | nucleus | 28.11 | 36.31 |
| PGSC0003DMT400011779 | Potato | nucleus | 28.11 | 36.31 |
| CDX92103 | Canola | nucleus | 27.19 | 35.54 |
| KXG32453 | Sorghum | nucleus | 20.28 | 35.2 |
| Bra022184.1-P | Field mustard | nucleus | 26.73 | 34.94 |
| CDY68751 | Canola | cytosol, mitochondrion | 16.13 | 34.65 |
| CDY34981 | Canola | nucleus | 27.19 | 34.5 |
| Bra021209.1-P | Field mustard | nucleus | 27.19 | 34.5 |
| Bra033533.1-P | Field mustard | nucleus | 28.11 | 34.08 |
| CDY32214 | Canola | nucleus | 28.11 | 34.08 |
| PGSC0003DMT400060241 | Potato | nucleus | 30.88 | 34.01 |
| CDX95897 | Canola | nucleus | 25.35 | 33.54 |
| Solyc05g054400.2.1 | Tomato | nucleus | 30.41 | 33.5 |
| CDY52723 | Canola | nucleus | 27.65 | 33.33 |
| KXG21349 | Sorghum | cytosol | 23.96 | 33.33 |
| CDX82388 | Canola | nucleus | 26.73 | 33.33 |
| AT4G16141.1 | Thale cress | cytosol | 29.49 | 32.49 |
| AT3G16870.1 | Thale cress | nucleus | 27.65 | 31.58 |
| CDX75893 | Canola | nucleus | 26.27 | 31.15 |
| CDX80603 | Canola | nucleus | 19.82 | 29.25 |
| KXG33047 | Sorghum | extracellular | 17.97 | 15.98 |
| EES19963 | Sorghum | mitochondrion, nucleus, vacuole | 16.13 | 15.28 |
| EER88552 | Sorghum | nucleus | 26.73 | 15.03 |
| KXG29816 | Sorghum | nucleus | 24.42 | 13.7 |
| EES20002 | Sorghum | plastid | 17.51 | 12.84 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | EntrezGene:8074146 | UniProt:C5XJF8 | EnsemblPlants:EES04307 | ProteinID:EES04307 |
| ProteinID:EES04307.1 | GO:GO:0000977 | GO:GO:0001085 | GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003682 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005667 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0043565 | GO:GO:0045944 | GO:GO:0046872 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF279 | SMART:SM00401 |
| EnsemblPlantsGene:SORBI_3003G445800 | SUPFAM:SSF57716 | unigene:Sbi.17086 | UniParc:UPI0001A8588F | RefSeq:XP_002459187.1 | InterPro:Znf_GATA |
| InterPro:Znf_NHR/GATA | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:74361992..74363609
Molecular Weight (calculated)
23953.2 Da
IEP (calculated)
10.192
GRAVY (calculated)
-1.183
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEMEVEMG TDPNPNPNPN PNTSPSAADD AATASGEAKA CADCHTTKTP LWRGGPEGPK SLCNACGIRY RKRRRQALGL DAAAADSQQD QQQPKKKATA
101: DPQQQDQHHL RKKAADPQQQ DQHHLRKKAA AAATTDPQQQ DRKKAAAASS TNKKDKDKED NKKKKDQQVT VELRVVGFGK EVMLKQRRRM RRKKCMSEEE
201: RAAVLLMALS SGVIYAS
101: DPQQQDQHHL RKKAADPQQQ DQHHLRKKAA AAATTDPQQQ DRKKAAAASS TNKKDKDKED NKKKKDQQVT VELRVVGFGK EVMLKQRRRM RRKKCMSEEE
201: RAAVLLMALS SGVIYAS
001: MSMTEETKTT KLESAGDSSD VDNGNCSSSG SGGDTKKTCV DCGTSRTPLW RGGPAGPKSL CNACGIKSRK KRQAALGIRQ DDIKIKSKSN NNLGLESRNV
101: KTGKGEPVNV KIAKCEPGIV KIAKGEPGNV KNKIKRDPEN SSSSNNNKKN VKRVGRFLDF GFKVPAMKRS AVEKKRLWRK LGEEERAAVL LMALSCG
101: KTGKGEPVNV KIAKCEPGIV KIAKGEPGNV KNKIKRDPEN SSSSNNNKKN VKRVGRFLDF GFKVPAMKRS AVEKKRLWRK LGEEERAAVL LMALSCG
Arabidopsis Description
GATA type zinc finger transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q8GW81]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.