Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012742.1-P | Field mustard | nucleus | 88.14 | 93.41 |
| CDX90545 | Canola | nucleus | 77.4 | 93.2 |
| CDY34429 | Canola | cytosol | 74.01 | 85.62 |
| CDY32214 | Canola | nucleus | 79.66 | 78.77 |
| CDX95897 | Canola | nucleus | 63.28 | 68.29 |
| CDY34981 | Canola | nucleus | 63.84 | 66.08 |
| CDX92103 | Canola | nucleus | 61.58 | 65.66 |
| CDX82388 | Canola | nucleus | 62.71 | 63.79 |
| CDY52723 | Canola | nucleus | 63.84 | 62.78 |
| CDX75893 | Canola | nucleus | 61.58 | 59.56 |
| CDY05639 | Canola | nucleus | 38.42 | 51.91 |
| CDX85400 | Canola | nucleus | 36.72 | 51.18 |
| CDX86241 | Canola | nucleus | 36.16 | 50.39 |
| CDY33918 | Canola | nucleus | 38.42 | 48.23 |
| CDY25008 | Canola | nucleus | 24.29 | 43.0 |
| CDX87024 | Canola | nucleus | 24.86 | 42.72 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 28.81 | 41.13 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 34.46 | 40.94 |
| CDY34933 | Canola | nucleus | 32.2 | 40.71 |
| Solyc12g099370.1.1 | Tomato | nucleus | 36.72 | 38.69 |
| PGSC0003DMT400011779 | Potato | nucleus | 36.72 | 38.69 |
| Os01t0976800-01 | Rice | nucleus | 29.38 | 36.62 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 29.38 | 36.62 |
| EER93149 | Sorghum | nucleus | 32.2 | 36.31 |
| TraesCS5D01G508800.1 | Wheat | nucleus | 32.77 | 35.8 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 28.25 | 35.21 |
| Solyc05g054400.2.1 | Tomato | nucleus | 38.98 | 35.03 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 24.86 | 34.92 |
| HORVU5Hr1G116310.1 | Barley | nucleus | 31.64 | 34.57 |
| Zm00001d034751_P001 | Maize | nucleus | 31.64 | 34.36 |
| TraesCS5B01G508800.1 | Wheat | nucleus | 32.2 | 34.13 |
| PGSC0003DMT400060241 | Potato | nucleus | 37.85 | 34.01 |
| CDY68751 | Canola | cytosol, mitochondrion | 18.64 | 32.67 |
| Zm00001d037605_P001 | Maize | nucleus | 25.99 | 32.17 |
| KXG32453 | Sorghum | nucleus | 22.6 | 32.0 |
| TraesCS3A01G538400.1 | Wheat | nucleus | 29.94 | 31.55 |
| Os01t0343300-01 | Rice | nucleus | 23.16 | 31.3 |
| TraesCS3D01G544000.1 | Wheat | nucleus | 30.51 | 30.17 |
| TraesCS3B01G603900.1 | Wheat | nucleus | 30.51 | 30.0 |
| EES04307 | Sorghum | nucleus | 36.72 | 29.95 |
| HORVU6Hr1G093630.3 | Barley | mitochondrion | 22.6 | 29.85 |
| Zm00001d011771_P001 | Maize | nucleus | 32.77 | 29.74 |
| Zm00001d009193_P001 | Maize | plastid | 23.16 | 29.5 |
| TraesCS1B01G126600.1 | Wheat | cytosol | 24.29 | 29.45 |
| TraesCS4A01G364700.1 | Wheat | nucleus | 29.94 | 29.28 |
| TraesCS1D01G106100.1 | Wheat | cytosol | 23.73 | 28.77 |
| CDX80603 | Canola | nucleus | 23.73 | 28.57 |
| KXG21349 | Sorghum | cytosol | 24.86 | 28.21 |
| Zm00001d040775_P001 | Maize | nucleus | 22.6 | 27.21 |
| TraesCS1A01G097300.1 | Wheat | cytosol | 23.73 | 26.42 |
| Os05t0155400-01 | Rice | mitochondrion, nucleus, vacuole | 25.42 | 23.32 |
| HORVU1Hr1G022710.3 | Barley | plastid | 23.16 | 18.98 |
| CDY13040 | Canola | cytosol | 18.64 | 16.58 |
| CDY72649 | Canola | nucleus | 18.64 | 16.5 |
| CDY60289 | Canola | nucleus | 18.08 | 15.84 |
| CDY51221 | Canola | nucleus | 17.51 | 15.42 |
| CDY53079 | Canola | cytosol | 17.51 | 14.98 |
| CDY69687 | Canola | nucleus | 14.69 | 13.76 |
| CDY68627 | Canola | nucleus | 16.95 | 13.51 |
| CDX69237 | Canola | nucleus | 16.95 | 13.45 |
| CDY70754 | Canola | nucleus | 16.95 | 13.45 |
| CDX89358 | Canola | nucleus | 27.12 | 13.33 |
| CDX94365 | Canola | nucleus | 27.12 | 13.33 |
| CDY24779 | Canola | nucleus | 15.82 | 13.15 |
| CDX72587 | Canola | cytosol | 16.38 | 12.78 |
| CDY42753 | Canola | nucleus | 25.99 | 12.43 |
| CDY42752 | Canola | nucleus | 25.99 | 12.43 |
| CDX88593 | Canola | nucleus | 24.86 | 12.39 |
| CDY45238 | Canola | nucleus | 16.38 | 12.29 |
| CDY30768 | Canola | nucleus | 15.82 | 12.28 |
| CDY67546 | Canola | nucleus | 25.99 | 12.23 |
| CDX77958 | Canola | nucleus | 18.08 | 12.03 |
| CDY28986 | Canola | cytosol | 18.08 | 11.68 |
| CDY32755 | Canola | nucleus | 25.42 | 11.63 |
| CDY32891 | Canola | nucleus | 25.42 | 11.6 |
| CDY67979 | Canola | nucleus | 24.86 | 11.22 |
| CDY65439 | Canola | nucleus | 24.29 | 11.2 |
| CDY20709 | Canola | nucleus | 24.86 | 11.17 |
| CDX90680 | Canola | nucleus | 17.51 | 11.15 |
| CDX73777 | Canola | nucleus | 17.51 | 10.69 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078F9G9 | UniProt:A0A078F9G9 | EnsemblPlants:CDY09717 | ProteinID:CDY09717 |
| ProteinID:CDY09717.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00031390001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF242 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0004EE3683 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
BnaC07g33440DBnaC07g33440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9G9]
Coordinates
chrLK031998:+:575456..576567
Molecular Weight (calculated)
18987.6 Da
IEP (calculated)
10.102
GRAVY (calculated)
-0.812
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMTEETKTT KLESAGDLSD VENGNCSSSG SGGDTKKTCV DCGTNKTPLW RGGPAGPKSL CNACGIKSRK KRQAAHGIKH EDNNNKIKNN KSGNDLALDN
101: QTVKNGNGDS GNVKSKIKTV TEDCNNSKKS VKGASRFLDF GFKVPVMKRS VVEKKRVWMK MGEEERAAVL LMALSCG
101: QTVKNGNGDS GNVKSKIKTV TEDCNNSKKS VKGASRFLDF GFKVPVMKRS VVEKKRVWMK MGEEERAAVL LMALSCG
001: MSMTEETKTT KLESAGDSSD VDNGNCSSSG SGGDTKKTCV DCGTSRTPLW RGGPAGPKSL CNACGIKSRK KRQAALGIRQ DDIKIKSKSN NNLGLESRNV
101: KTGKGEPVNV KIAKCEPGIV KIAKGEPGNV KNKIKRDPEN SSSSNNNKKN VKRVGRFLDF GFKVPAMKRS AVEKKRLWRK LGEEERAAVL LMALSCG
101: KTGKGEPVNV KIAKCEPGIV KIAKGEPGNV KNKIKRDPEN SSSSNNNKKN VKRVGRFLDF GFKVPAMKRS AVEKKRLWRK LGEEERAAVL LMALSCG
Arabidopsis Description
GATA type zinc finger transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q8GW81]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.