Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010563.1-P | Field mustard | cytosol | 98.12 | 98.12 |
| CDY53079 | Canola | cytosol | 88.73 | 91.3 |
| AT4G36620.1 | Thale cress | cytosol | 82.16 | 82.94 |
| CDY69687 | Canola | nucleus | 69.95 | 78.84 |
| CDY70754 | Canola | nucleus | 80.75 | 77.13 |
| CDX72587 | Canola | cytosol | 81.69 | 76.65 |
| CDX69237 | Canola | nucleus | 79.81 | 76.23 |
| CDY68627 | Canola | nucleus | 79.34 | 76.13 |
| CDY13040 | Canola | cytosol | 45.07 | 48.24 |
| CDY72649 | Canola | nucleus | 44.6 | 47.5 |
| CDY60289 | Canola | nucleus | 44.13 | 46.53 |
| CDY51221 | Canola | nucleus | 43.19 | 45.77 |
| CDX77958 | Canola | nucleus | 52.58 | 42.11 |
| CDY28986 | Canola | cytosol | 53.52 | 41.61 |
| CDX90680 | Canola | nucleus | 53.52 | 41.01 |
| PGSC0003DMT400009031 | Potato | plastid | 47.42 | 40.89 |
| Solyc02g085190.1.1 | Tomato | plastid | 46.95 | 39.68 |
| CDX73777 | Canola | nucleus | 53.99 | 39.66 |
| VIT_04s0023g01840.t01 | Wine grape | cytosol, plastid | 42.25 | 37.5 |
| CDY45238 | Canola | nucleus | 38.03 | 34.32 |
| PGSC0003DMT400040074 | Potato | nucleus | 38.03 | 32.66 |
| GSMUA_Achr6P27250_001 | Banana | cytosol, extracellular, nucleus | 34.74 | 31.9 |
| CDY30768 | Canola | nucleus | 33.8 | 31.58 |
| Solyc02g062760.2.1 | Tomato | nucleus | 37.56 | 31.5 |
| Zm00001d009604_P001 | Maize | cytosol, nucleus, plastid | 29.11 | 30.54 |
| TraesCS3B01G269000.1 | Wheat | cytosol, extracellular, nucleus | 31.92 | 30.36 |
| Zm00001d043969_P001 | Maize | endoplasmic reticulum | 32.86 | 30.04 |
| TraesCS3D01G241100.1 | Wheat | cytosol, extracellular, nucleus | 32.39 | 30.0 |
| HORVU3Hr1G059870.2 | Barley | cytosol, extracellular, nucleus | 32.39 | 29.74 |
| GSMUA_Achr7P25620_001 | Banana | nucleus | 32.39 | 29.61 |
| TraesCS3A01G240800.1 | Wheat | cytosol, extracellular, nucleus | 32.39 | 29.49 |
| Os05t0567900-00 | Rice | cytosol, extracellular, plastid | 34.27 | 29.2 |
| GSMUA_Achr3P31070_001 | Banana | cytosol, nucleus, plastid | 28.64 | 28.91 |
| EES19963 | Sorghum | mitochondrion, nucleus, vacuole | 30.52 | 28.38 |
| KXG33047 | Sorghum | extracellular | 32.39 | 28.28 |
| Os01t0662800-00 | Rice | cytosol, extracellular, nucleus | 31.92 | 28.1 |
| CDY25008 | Canola | nucleus | 13.15 | 28.0 |
| KRH43324 | Soybean | nucleus | 17.37 | 27.21 |
| CDX87024 | Canola | nucleus | 13.15 | 27.18 |
| CDY68751 | Canola | cytosol, mitochondrion | 11.74 | 24.75 |
| CDY05639 | Canola | nucleus | 14.55 | 23.66 |
| CDX85400 | Canola | nucleus | 14.08 | 23.62 |
| CDX86241 | Canola | nucleus | 13.62 | 22.83 |
| CDY34933 | Canola | nucleus | 14.08 | 21.43 |
| CDY33918 | Canola | nucleus | 14.08 | 21.28 |
| CDX95897 | Canola | nucleus | 15.02 | 19.51 |
| CDX92103 | Canola | nucleus | 15.02 | 19.28 |
| CDY34429 | Canola | cytosol | 13.62 | 18.95 |
| CDX90545 | Canola | nucleus | 12.21 | 17.69 |
| CDX75893 | Canola | nucleus | 14.55 | 16.94 |
| CDX82388 | Canola | nucleus | 13.62 | 16.67 |
| CDY34981 | Canola | nucleus | 13.15 | 16.37 |
| CDX80603 | Canola | nucleus | 11.27 | 16.33 |
| CDY32214 | Canola | nucleus | 13.62 | 16.2 |
| CDY52723 | Canola | nucleus | 13.62 | 16.11 |
| CDY09717 | Canola | nucleus | 13.15 | 15.82 |
| CDX88593 | Canola | nucleus | 21.13 | 12.68 |
| CDY42753 | Canola | nucleus | 20.66 | 11.89 |
| CDY42752 | Canola | nucleus | 20.66 | 11.89 |
| CDY65439 | Canola | nucleus | 21.13 | 11.72 |
| CDY67546 | Canola | nucleus | 20.19 | 11.44 |
| CDY67979 | Canola | nucleus | 20.66 | 11.22 |
| CDY20709 | Canola | nucleus | 20.66 | 11.17 |
| CDY32755 | Canola | nucleus | 19.72 | 10.85 |
| CDY32891 | Canola | nucleus | 19.25 | 10.57 |
| CDX94365 | Canola | nucleus | 17.84 | 10.56 |
| CDX89358 | Canola | nucleus | 17.37 | 10.28 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078GHJ4 | UniProt:A0A078GHJ4 | EnsemblPlants:CDY24779 | ProteinID:CDY24779 |
| ProteinID:CDY24779.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00027229001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF305 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0004EEF69D | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
BnaA08g15310DBnaA08g15310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHJ4]
Coordinates
chrLK032164:+:116642..117600
Molecular Weight (calculated)
23469.8 Da
IEP (calculated)
7.907
GRAVY (calculated)
-0.732
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSMFFSSE NDVVHHSTPY ASVDCTLSLG TPSTRLCNDD DRRFSSHTSN RLGWDFLHGA KKGIGGGGDN SYLLPRRCAN CDATSTPLWR NGPRGPKSLC
101: NACGIRFKKE ERRASTAGIS TSGGGSTAAG VSTSDHHGGA NYYYNNNHYA SPTPWIHHQQ HNTQRVPYYS PANNQYSFVD DAREVNHDAT ADSFLSWRLN
201: VADRTSLVHD FTM
101: NACGIRFKKE ERRASTAGIS TSGGGSTAAG VSTSDHHGGA NYYYNNNHYA SPTPWIHHQQ HNTQRVPYYS PANNQYSFVD DAREVNHDAT ADSFLSWRLN
201: VADRTSLVHD FTM
001: MGFSMFFSPE NDVSHHSSPY ASVDCTLSLG TPSTRLCNED DERRFSSHTS DTIGWDFLNG SKKGGGGGGH NLLARRCANC DTTSTPLWRN GPRGPKSLCN
101: ACGIRFKKEE RRASTARNST SGGGSTAAGV PTLDHQASAN YYYNNNNQYA SSSPWHHQHN TQRVPYYSPA NNEYSYVDDV RVVDHDVTTD PFLSWRLNVA
201: DRTGLVHDFT M
101: ACGIRFKKEE RRASTARNST SGGGSTAAGV PTLDHQASAN YYYNNNNQYA SSSPWHHQHN TQRVPYYSPA NNEYSYVDDV RVVDHDVTTD PFLSWRLNVA
201: DRTGLVHDFT M
Arabidopsis Description
GATA19Uncharacterized protein At4g36620 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVL8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.