Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33918 | Canola | nucleus | 93.89 | 87.23 |
| CDX86241 | Canola | nucleus | 75.57 | 77.95 |
| CDX85400 | Canola | nucleus | 75.57 | 77.95 |
| AT5G49300.1 | Thale cress | cytosol | 80.92 | 76.26 |
| CDY34933 | Canola | nucleus | 62.6 | 58.57 |
| VIT_05s0077g01450.t01 | Wine grape | nucleus | 65.65 | 56.21 |
| KRH02314 | Soybean | nucleus | 54.2 | 50.71 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 45.8 | 48.39 |
| CDY25008 | Canola | nucleus | 35.88 | 47.0 |
| CDX87024 | Canola | nucleus | 35.88 | 45.63 |
| KRH50773 | Soybean | nucleus | 53.44 | 44.3 |
| CDX92103 | Canola | nucleus | 54.96 | 43.37 |
| CDY34429 | Canola | cytosol | 50.38 | 43.14 |
| CDX90545 | Canola | nucleus | 47.33 | 42.18 |
| CDX95897 | Canola | nucleus | 51.91 | 41.46 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 39.69 | 41.27 |
| PGSC0003DMT400011779 | Potato | nucleus | 52.67 | 41.07 |
| Solyc12g099370.1.1 | Tomato | nucleus | 52.67 | 41.07 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 44.27 | 40.85 |
| CDY34981 | Canola | nucleus | 52.67 | 40.35 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 44.27 | 38.93 |
| CDY52723 | Canola | nucleus | 53.44 | 38.89 |
| CDY09717 | Canola | nucleus | 51.91 | 38.42 |
| CDY32214 | Canola | nucleus | 51.91 | 37.99 |
| CDX82388 | Canola | nucleus | 49.62 | 37.36 |
| Os01t0976800-01 | Rice | nucleus | 40.46 | 37.32 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 39.69 | 36.62 |
| CDX75893 | Canola | nucleus | 49.62 | 35.52 |
| EER93149 | Sorghum | nucleus | 41.98 | 35.03 |
| CDY68751 | Canola | cytosol, mitochondrion | 26.72 | 34.65 |
| PGSC0003DMT400060241 | Potato | nucleus | 51.91 | 34.52 |
| Solyc05g054400.2.1 | Tomato | nucleus | 51.91 | 34.52 |
| Zm00001d034751_P001 | Maize | nucleus | 41.22 | 33.13 |
| HORVU5Hr1G116310.1 | Barley | nucleus | 39.69 | 32.1 |
| TraesCS5D01G508800.1 | Wheat | nucleus | 39.69 | 32.1 |
| Zm00001d037605_P001 | Maize | nucleus | 34.35 | 31.47 |
| CDX80603 | Canola | nucleus | 35.11 | 31.29 |
| TraesCS5B01G508800.1 | Wheat | nucleus | 39.69 | 31.14 |
| KXG32453 | Sorghum | nucleus | 29.01 | 30.4 |
| TraesCS3A01G538400.1 | Wheat | nucleus | 38.17 | 29.76 |
| HORVU6Hr1G093630.3 | Barley | mitochondrion | 29.01 | 28.36 |
| Os01t0343300-01 | Rice | nucleus | 28.24 | 28.24 |
| Zm00001d009193_P001 | Maize | plastid | 29.77 | 28.06 |
| TraesCS3D01G544000.1 | Wheat | nucleus | 38.17 | 27.93 |
| TraesCS3B01G603900.1 | Wheat | nucleus | 38.17 | 27.78 |
| Zm00001d011771_P001 | Maize | nucleus | 41.22 | 27.69 |
| KXG21349 | Sorghum | cytosol | 32.82 | 27.56 |
| TraesCS1B01G126600.1 | Wheat | cytosol | 30.53 | 27.4 |
| EES04307 | Sorghum | nucleus | 44.27 | 26.73 |
| TraesCS1D01G106100.1 | Wheat | cytosol | 29.77 | 26.71 |
| TraesCS4A01G364700.1 | Wheat | nucleus | 36.64 | 26.52 |
| Zm00001d040775_P001 | Maize | nucleus | 29.01 | 25.85 |
| TraesCS1A01G097300.1 | Wheat | cytosol | 29.77 | 24.53 |
| Os05t0155400-01 | Rice | mitochondrion, nucleus, vacuole | 33.59 | 22.8 |
| HORVU1Hr1G022710.3 | Barley | plastid | 29.77 | 18.06 |
| CDY53079 | Canola | cytosol | 25.19 | 15.94 |
| CDY13040 | Canola | cytosol | 23.66 | 15.58 |
| CDY72649 | Canola | nucleus | 23.66 | 15.5 |
| CDY68627 | Canola | nucleus | 25.19 | 14.86 |
| CDY60289 | Canola | nucleus | 22.9 | 14.85 |
| CDY69687 | Canola | nucleus | 21.37 | 14.81 |
| CDX69237 | Canola | nucleus | 25.19 | 14.8 |
| CDY24779 | Canola | nucleus | 23.66 | 14.55 |
| CDX72587 | Canola | cytosol | 25.19 | 14.54 |
| CDY51221 | Canola | nucleus | 22.14 | 14.43 |
| CDY70754 | Canola | nucleus | 24.43 | 14.35 |
| CDX77958 | Canola | nucleus | 27.48 | 13.53 |
| CDX88593 | Canola | nucleus | 36.64 | 13.52 |
| CDX89358 | Canola | nucleus | 36.64 | 13.33 |
| CDY45238 | Canola | nucleus | 23.66 | 13.14 |
| CDX94365 | Canola | nucleus | 35.88 | 13.06 |
| CDY42753 | Canola | nucleus | 36.64 | 12.97 |
| CDY42752 | Canola | nucleus | 36.64 | 12.97 |
| CDY67546 | Canola | nucleus | 35.88 | 12.5 |
| CDX73777 | Canola | nucleus | 27.48 | 12.41 |
| CDY28986 | Canola | cytosol | 25.95 | 12.41 |
| CDY32755 | Canola | nucleus | 36.64 | 12.4 |
| CDY30768 | Canola | nucleus | 21.37 | 12.28 |
| CDY67979 | Canola | nucleus | 36.64 | 12.24 |
| CDY65439 | Canola | nucleus | 35.88 | 12.24 |
| CDX90680 | Canola | nucleus | 25.95 | 12.23 |
| CDY20709 | Canola | nucleus | 36.64 | 12.18 |
| CDY32891 | Canola | nucleus | 35.88 | 12.11 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078EYJ1 | EnsemblPlants:CDY05639 | ProteinID:CDY05639 | ProteinID:CDY05639.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00120624001 | InterPro:IPR000679 | InterPro:IPR013088 | PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 |
| PANTHER:PTHR10071 | PANTHER:PTHR10071:SF242 | SMART:SM00401 | SUPFAM:SSF57716 | UniParc:UPI000226277F | InterPro:Znf_GATA |
| InterPro:Znf_NHR/GATA | : | : | : | : | : |
Description
BnaC02g38980D
Coordinates
chrLK031963:+:445382..446359
Molecular Weight (calculated)
14528.5 Da
IEP (calculated)
10.310
GRAVY (calculated)
-1.018
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDHSEEEYS ETMKRRAGDA IEQNKKTCAD CGTSKTPLWR GGPAGPKSLC NACGIRNRKK RRGAEDKKQK KTNSGGGDLK RSPKFGESMK QRIMDLGMTK
101: RSTVEKQLRK LGEEEQAAVL LMALSYGSVY A
101: RSTVEKQLRK LGEEEQAAVL LMALSYGSVY A
001: MLDHSEKVLL VDSETMKTRA EDMIEQNNTS VNDKKKTCAD CGTSKTPLWR GGPVGPKSLC NACGIRNRKK RRGGTEDNKK LKKSSSGGGN RKFGESLKQS
101: LMDLGIRKRS TVEKQRQKLG EEEQAAVLLM ALSYGSVYA
101: LMDLGIRKRS TVEKQRQKLG EEEQAAVLLM ALSYGSVYA
Arabidopsis Description
GATA16Uncharacterized protein At5g49300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.