Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG32453 | Sorghum | nucleus | 75.51 | 88.8 |
| Zm00001d009193_P001 | Maize | plastid | 74.15 | 78.42 |
| Os01t0343300-01 | Rice | nucleus | 66.67 | 74.81 |
| Zm00001d037605_P001 | Maize | nucleus | 55.1 | 56.64 |
| Solyc09g075610.2.1 | Tomato | plastid | 28.57 | 47.19 |
| KRH68462 | Soybean | cytosol | 25.17 | 46.25 |
| CDY25008 | Canola | nucleus | 27.89 | 41.0 |
| Bra036600.1-P | Field mustard | nucleus | 28.57 | 40.78 |
| Bra009926.1-P | Field mustard | cytosol | 21.77 | 40.51 |
| CDX87024 | Canola | nucleus | 27.89 | 39.81 |
| PGSC0003DMT400081417 | Potato | nucleus | 28.57 | 39.62 |
| AT5G26930.1 | Thale cress | cytosol | 30.61 | 37.5 |
| KRG96744 | Soybean | cytosol, mitochondrion, nucleus | 20.41 | 36.14 |
| VIT_14s0060g01520.t01 | Wine grape | nucleus | 27.89 | 33.06 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 27.89 | 33.06 |
| CDY68751 | Canola | cytosol, mitochondrion | 21.77 | 31.68 |
| Bra037421.1-P | Field mustard | nucleus | 26.53 | 30.71 |
| CDX86241 | Canola | nucleus | 26.53 | 30.71 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 30.61 | 30.2 |
| CDX85400 | Canola | nucleus | 25.85 | 29.92 |
| Zm00001d034751_P001 | Maize | nucleus | 32.65 | 29.45 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 25.17 | 29.37 |
| CDY05639 | Canola | nucleus | 25.85 | 29.01 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 27.89 | 28.87 |
| CDX80603 | Canola | nucleus | 28.57 | 28.57 |
| Solyc01g100220.2.1 | Tomato | nucleus | 28.57 | 28.19 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 27.21 | 28.17 |
| PGSC0003DMT400011779 | Potato | nucleus | 31.97 | 27.98 |
| Solyc12g099370.1.1 | Tomato | nucleus | 31.97 | 27.98 |
| PGSC0003DMT400063771 | Potato | nucleus | 28.57 | 27.81 |
| CDY34429 | Canola | cytosol | 28.57 | 27.45 |
| CDX90545 | Canola | nucleus | 27.21 | 27.21 |
| VIT_05s0077g01450.t01 | Wine grape | nucleus | 27.89 | 26.8 |
| Bra020650.1-P | Field mustard | nucleus | 25.17 | 26.43 |
| KRH02314 | Soybean | nucleus | 25.17 | 26.43 |
| CDY33918 | Canola | nucleus | 25.17 | 26.24 |
| CDX92103 | Canola | nucleus | 29.25 | 25.9 |
| Bra022184.1-P | Field mustard | nucleus | 29.25 | 25.9 |
| AT5G49300.1 | Thale cress | cytosol | 24.49 | 25.9 |
| CDX75893 | Canola | nucleus | 31.97 | 25.68 |
| CDX95897 | Canola | nucleus | 28.57 | 25.61 |
| AT3G06740.1 | Thale cress | nucleus | 25.85 | 25.5 |
| KRH50773 | Soybean | nucleus | 27.21 | 25.32 |
| CDX82388 | Canola | nucleus | 29.93 | 25.29 |
| AT3G16870.1 | Thale cress | nucleus | 31.97 | 24.74 |
| Bra021209.1-P | Field mustard | nucleus | 28.57 | 24.56 |
| Bra040288.1-P | Field mustard | nucleus | 23.13 | 24.46 |
| CDY34933 | Canola | nucleus | 23.13 | 24.29 |
| CDY32214 | Canola | nucleus | 29.25 | 24.02 |
| Bra033533.1-P | Field mustard | nucleus | 29.25 | 24.02 |
| CDY34981 | Canola | nucleus | 27.89 | 23.98 |
| Bra012742.1-P | Field mustard | nucleus | 26.53 | 23.35 |
| CDY52723 | Canola | nucleus | 28.57 | 23.33 |
| CDY09717 | Canola | nucleus | 27.21 | 22.6 |
| Solyc05g054400.2.1 | Tomato | nucleus | 29.93 | 22.34 |
| PGSC0003DMT400060241 | Potato | nucleus | 29.93 | 22.34 |
| AT4G16141.1 | Thale cress | cytosol | 29.25 | 21.83 |
| Zm00001d011771_P001 | Maize | nucleus | 28.57 | 21.54 |
| Zm00001d009604_P001 | Maize | cytosol, nucleus, plastid | 21.09 | 15.27 |
| Zm00001d043969_P001 | Maize | endoplasmic reticulum | 21.77 | 13.73 |
| Zm00001d009668_P001 | Maize | mitochondrion, nucleus | 21.77 | 11.85 |
| Zm00001d039113_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 20.41 | 10.56 |
| Zm00001d046354_P001 | Maize | nucleus | 25.85 | 10.27 |
| Zm00001d016361_P001 | Maize | nucleus | 25.17 | 10.0 |
Protein Annotations
| EntrezGene:100273183 | Gene3D:3.30.50.10 | MapMan:35.2 | UniProt:A0A1D6MSW5 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 |
| InterPro:IPR000679 | InterPro:IPR013088 | ProteinID:ONM32013.1 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF198 |
| SMART:SM00401 | SUPFAM:SSF57716 | UniParc:UPI0008427A5D | EnsemblPlantsGene:Zm00001d040775 | EnsemblPlants:Zm00001d040775_P001 | EnsemblPlants:Zm00001d040775_T001 |
| InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : | : | : |
Description
C2C2-GATA-transcription factor 27GATA transcription factor 16
Coordinates
chr3:+:64946021..64948546
Molecular Weight (calculated)
16046.0 Da
IEP (calculated)
9.738
GRAVY (calculated)
-0.660
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSADRSKID GIVVPEKGAR SCVECRATTT PMWRSGPTGP RQYFLDTEIG NTKCSSQSVV TSLCNACGIR YRKKRRQELG LEHNKQQQQQ QNNGEAKTGV
101: KDSSSNSSSG SSNFHVVQKR RLLMEVEEAA LLLMTLSSSP ASTLLHG
101: KDSSSNSSSG SSNFHVVQKR RLLMEVEEAA LLLMTLSSSP ASTLLHG
001: MLDHSEKVLL VDSETMKTRA EDMIEQNNTS VNDKKKTCAD CGTSKTPLWR GGPVGPKSLC NACGIRNRKK RRGGTEDNKK LKKSSSGGGN RKFGESLKQS
101: LMDLGIRKRS TVEKQRQKLG EEEQAAVLLM ALSYGSVYA
101: LMDLGIRKRS TVEKQRQKLG EEEQAAVLLM ALSYGSVYA
Arabidopsis Description
GATA16Uncharacterized protein At5g49300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.