Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040288.1-P | Field mustard | nucleus | 96.43 | 97.12 |
| AT3G06740.1 | Thale cress | nucleus | 76.43 | 71.81 |
| CDY05639 | Canola | nucleus | 58.57 | 62.6 |
| CDX85400 | Canola | nucleus | 54.29 | 59.84 |
| CDX86241 | Canola | nucleus | 53.57 | 59.06 |
| CDY33918 | Canola | nucleus | 58.57 | 58.16 |
| VIT_05s0077g01450.t01 | Wine grape | nucleus | 55.0 | 50.33 |
| KRH02314 | Soybean | nucleus | 48.57 | 48.57 |
| CDY25008 | Canola | nucleus | 33.57 | 47.0 |
| CDX87024 | Canola | nucleus | 33.57 | 45.63 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 39.29 | 44.35 |
| KRH50773 | Soybean | nucleus | 47.86 | 42.41 |
| PGSC0003DMT400011779 | Potato | nucleus | 45.71 | 38.1 |
| Solyc12g099370.1.1 | Tomato | nucleus | 45.71 | 38.1 |
| CDY34429 | Canola | cytosol | 41.43 | 37.91 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 37.86 | 37.32 |
| CDX92103 | Canola | nucleus | 43.57 | 36.75 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 37.14 | 36.62 |
| CDX90545 | Canola | nucleus | 37.86 | 36.05 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 32.14 | 35.71 |
| CDY68751 | Canola | cytosol, mitochondrion | 25.71 | 35.64 |
| Solyc05g054400.2.1 | Tomato | nucleus | 50.0 | 35.53 |
| PGSC0003DMT400060241 | Potato | nucleus | 50.0 | 35.53 |
| CDX95897 | Canola | nucleus | 41.43 | 35.37 |
| Os01t0976800-01 | Rice | nucleus | 35.71 | 35.21 |
| CDY34981 | Canola | nucleus | 42.14 | 34.5 |
| EER93149 | Sorghum | nucleus | 38.57 | 34.39 |
| CDY32214 | Canola | nucleus | 42.86 | 33.52 |
| CDY52723 | Canola | nucleus | 42.86 | 33.33 |
| Zm00001d034751_P001 | Maize | nucleus | 37.86 | 32.52 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 34.29 | 32.21 |
| CDY09717 | Canola | nucleus | 40.71 | 32.2 |
| HORVU5Hr1G116310.1 | Barley | nucleus | 37.14 | 32.1 |
| TraesCS5D01G508800.1 | Wheat | nucleus | 37.14 | 32.1 |
| TraesCS5B01G508800.1 | Wheat | nucleus | 37.14 | 31.14 |
| CDX82388 | Canola | nucleus | 38.57 | 31.03 |
| CDX80603 | Canola | nucleus | 32.14 | 30.61 |
| CDX75893 | Canola | nucleus | 39.29 | 30.05 |
| TraesCS3A01G538400.1 | Wheat | nucleus | 35.71 | 29.76 |
| Os01t0343300-01 | Rice | nucleus | 27.14 | 29.01 |
| KXG32453 | Sorghum | nucleus | 25.0 | 28.0 |
| Zm00001d037605_P001 | Maize | nucleus | 28.57 | 27.97 |
| TraesCS3B01G603900.1 | Wheat | nucleus | 35.71 | 27.78 |
| Zm00001d011771_P001 | Maize | nucleus | 38.57 | 27.69 |
| HORVU6Hr1G093630.3 | Barley | mitochondrion | 26.43 | 27.61 |
| TraesCS3D01G544000.1 | Wheat | nucleus | 35.0 | 27.37 |
| EES04307 | Sorghum | nucleus | 42.14 | 27.19 |
| TraesCS4A01G364700.1 | Wheat | nucleus | 35.0 | 27.07 |
| TraesCS1B01G126600.1 | Wheat | cytosol | 27.86 | 26.71 |
| TraesCS1D01G106100.1 | Wheat | cytosol | 27.14 | 26.03 |
| Zm00001d009193_P001 | Maize | plastid | 25.71 | 25.9 |
| KXG21349 | Sorghum | cytosol | 27.86 | 25.0 |
| TraesCS1A01G097300.1 | Wheat | cytosol | 26.43 | 23.27 |
| Zm00001d040775_P001 | Maize | nucleus | 24.29 | 23.13 |
| Os05t0155400-01 | Rice | mitochondrion, nucleus, vacuole | 29.29 | 21.24 |
| HORVU1Hr1G022710.3 | Barley | plastid | 27.14 | 17.59 |
| CDY13040 | Canola | cytosol | 22.14 | 15.58 |
| CDY72649 | Canola | nucleus | 21.43 | 15.0 |
| CDY53079 | Canola | cytosol | 22.14 | 14.98 |
| CDY51221 | Canola | nucleus | 21.43 | 14.93 |
| CDY60289 | Canola | nucleus | 21.43 | 14.85 |
| CDY69687 | Canola | nucleus | 20.0 | 14.81 |
| CDY45238 | Canola | nucleus | 24.29 | 14.41 |
| CDY24779 | Canola | nucleus | 21.43 | 14.08 |
| CDY68627 | Canola | nucleus | 22.14 | 13.96 |
| CDX69237 | Canola | nucleus | 22.14 | 13.9 |
| CDY70754 | Canola | nucleus | 22.14 | 13.9 |
| CDX72587 | Canola | cytosol | 22.14 | 13.66 |
| CDY30768 | Canola | nucleus | 22.14 | 13.6 |
| CDX88593 | Canola | nucleus | 33.57 | 13.24 |
| CDX77958 | Canola | nucleus | 24.29 | 12.78 |
| CDX89358 | Canola | nucleus | 32.14 | 12.5 |
| CDX94365 | Canola | nucleus | 32.14 | 12.5 |
| CDY42753 | Canola | nucleus | 32.14 | 12.16 |
| CDY42752 | Canola | nucleus | 32.14 | 12.16 |
| CDY32755 | Canola | nucleus | 33.57 | 12.14 |
| CDX73777 | Canola | nucleus | 25.0 | 12.07 |
| CDY28986 | Canola | cytosol | 23.57 | 12.04 |
| CDY65439 | Canola | nucleus | 32.86 | 11.98 |
| CDX90680 | Canola | nucleus | 23.57 | 11.87 |
| CDY32891 | Canola | nucleus | 32.86 | 11.86 |
| CDY67546 | Canola | nucleus | 31.43 | 11.7 |
| CDY67979 | Canola | nucleus | 32.14 | 11.48 |
| CDY20709 | Canola | nucleus | 32.14 | 11.42 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:A0A078HDM8 | UniProt:A0A078HDM8 | EnsemblPlants:CDY34933 | ProteinID:CDY34933 |
| ProteinID:CDY34933.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00057511001 | InterPro:IPR000679 | InterPro:IPR013088 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF242 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0004EEA586 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
BnaA01g32640DGATA transcription factor 15 [Source:Projected from Arabidopsis thaliana (AT3G06740) UniProtKB/Swiss-Prot;Acc:Q8LG10]
Coordinates
chrLK032343:-:215015..216071
Molecular Weight (calculated)
15169.3 Da
IEP (calculated)
10.277
GRAVY (calculated)
-0.669
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDHTEKIFD SEAMTTKFTS VDATEDISSS SDGGGGGVNS EKKSCAICGT SKTPLWRGGP TGPKSLCNAC GIRNKKKKST VRSEVKKKKK KQSSKIGDSL
101: KQRLMELGRE VMMQRKKKLG EEEQAAVLLM ALSYASSVYA
101: KQRLMELGRE VMMQRKKKLG EEEQAAVLLM ALSYASSVYA
001: MLDPTEKVID SESMESKLTS VDAIEEHSSS SSNEAISNEK KSCAICGTSK TPLWRGGPAG PKSLCNACGI RNRKKRRTLI SNRSEDKKKK SHNRNPKFGD
101: SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
101: SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
Arabidopsis Description
GATA15GATA transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.