Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040288.1-P | Field mustard | nucleus | 72.48 | 77.7 |
| CDY34933 | Canola | nucleus | 71.81 | 76.43 |
| AT5G49300.1 | Thale cress | cytosol | 60.4 | 64.75 |
| VIT_05s0077g01450.t01 | Wine grape | nucleus | 57.05 | 55.56 |
| KRH02314 | Soybean | nucleus | 48.99 | 52.14 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 42.95 | 51.61 |
| KRH50773 | Soybean | nucleus | 48.32 | 45.57 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 40.27 | 42.25 |
| PGSC0003DMT400011779 | Potato | nucleus | 46.98 | 41.67 |
| Solyc12g099370.1.1 | Tomato | nucleus | 46.98 | 41.67 |
| AT5G26930.1 | Thale cress | cytosol | 32.89 | 40.83 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 34.23 | 40.48 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 37.58 | 39.44 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 38.93 | 38.93 |
| EER93149 | Sorghum | nucleus | 40.94 | 38.85 |
| Os01t0976800-01 | Rice | nucleus | 36.91 | 38.73 |
| PGSC0003DMT400060241 | Potato | nucleus | 48.99 | 37.06 |
| Solyc05g054400.2.1 | Tomato | nucleus | 48.99 | 37.06 |
| Zm00001d034751_P001 | Maize | nucleus | 40.27 | 36.81 |
| HORVU5Hr1G116310.1 | Barley | nucleus | 38.93 | 35.8 |
| AT3G16870.1 | Thale cress | nucleus | 44.97 | 35.26 |
| TraesCS5D01G508800.1 | Wheat | nucleus | 37.58 | 34.57 |
| TraesCS5B01G508800.1 | Wheat | nucleus | 38.26 | 34.13 |
| TraesCS3A01G538400.1 | Wheat | nucleus | 36.24 | 32.14 |
| AT4G16141.1 | Thale cress | cytosol | 42.28 | 31.98 |
| HORVU6Hr1G093630.3 | Barley | mitochondrion | 28.19 | 31.34 |
| KXG32453 | Sorghum | nucleus | 26.17 | 31.2 |
| TraesCS3D01G544000.1 | Wheat | nucleus | 36.91 | 30.73 |
| Os01t0343300-01 | Rice | nucleus | 26.85 | 30.53 |
| Zm00001d037605_P001 | Maize | nucleus | 28.86 | 30.07 |
| TraesCS4A01G364700.1 | Wheat | nucleus | 36.24 | 29.83 |
| Zm00001d011771_P001 | Maize | nucleus | 38.93 | 29.74 |
| TraesCS3B01G603900.1 | Wheat | nucleus | 35.57 | 29.44 |
| Zm00001d009193_P001 | Maize | plastid | 26.85 | 28.78 |
| EES04307 | Sorghum | nucleus | 41.61 | 28.57 |
| KXG21349 | Sorghum | cytosol | 27.52 | 26.28 |
| TraesCS1B01G126600.1 | Wheat | cytosol | 25.5 | 26.03 |
| Zm00001d040775_P001 | Maize | nucleus | 25.5 | 25.85 |
| TraesCS1D01G106100.1 | Wheat | cytosol | 24.83 | 25.34 |
| TraesCS1A01G097300.1 | Wheat | cytosol | 24.83 | 23.27 |
| Os05t0155400-01 | Rice | mitochondrion, nucleus, vacuole | 28.19 | 21.76 |
| HORVU1Hr1G022710.3 | Barley | plastid | 24.83 | 17.13 |
| AT4G36620.1 | Thale cress | cytosol | 21.48 | 15.17 |
| AT4G26150.1 | Thale cress | cytosol | 31.54 | 13.35 |
| AT2G18380.1 | Thale cress | cytosol | 18.12 | 12.98 |
| AT5G56860.1 | Thale cress | nucleus | 33.56 | 12.56 |
| AT3G50870.1 | Thale cress | cytosol | 22.82 | 11.53 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | EntrezGene:819859 | ProteinID:AAF63824.1 | ProteinID:AEE74450.1 | ArrayExpress:AT3G06740 |
| EnsemblPlantsGene:AT3G06740 | RefSeq:AT3G06740 | TAIR:AT3G06740 | RefSeq:AT3G06740-TAIR-G | EnsemblPlants:AT3G06740.1 | TAIR:AT3G06740.1 |
| EMBL:AY063926 | EMBL:AY084525 | EMBL:AY091250 | Symbol:GATA15 | GO:GO:0000977 | GO:GO:0001085 |
| GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005667 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006366 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0045944 | GO:GO:0046872 | InterPro:IPR000679 | InterPro:IPR013088 | RefSeq:NP_566290.1 | PFAM:PF00320 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | ScanProsite:PS00344 | PFscan:PS50114 |
| PANTHER:PTHR10071 | PANTHER:PTHR10071:SF242 | UniProt:Q8LG10 | SMART:SM00401 | SUPFAM:SSF57716 | UniParc:UPI00000A985B |
| InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : | : | : |
Description
GATA15GATA transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG10]
Coordinates
chr3:+:2126312..2127467
Molecular Weight (calculated)
16563.7 Da
IEP (calculated)
10.032
GRAVY (calculated)
-0.866
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDPTEKVID SESMESKLTS VDAIEEHSSS SSNEAISNEK KSCAICGTSK TPLWRGGPAG PKSLCNACGI RNRKKRRTLI SNRSEDKKKK SHNRNPKFGD
101: SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
101: SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.