Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010563.1-P | Field mustard | cytosol | 83.41 | 82.63 |
| CDY24779 | Canola | nucleus | 82.94 | 82.16 |
| CDY53079 | Canola | cytosol | 78.2 | 79.71 |
| AT2G18380.1 | Thale cress | cytosol | 45.5 | 46.15 |
| AT3G50870.1 | Thale cress | cytosol | 57.35 | 41.02 |
| Solyc02g085190.1.1 | Tomato | plastid | 47.39 | 39.68 |
| PGSC0003DMT400009031 | Potato | plastid | 46.45 | 39.68 |
| VIT_04s0023g01840.t01 | Wine grape | cytosol, plastid | 42.18 | 37.08 |
| Zm00001d009604_P001 | Maize | cytosol, nucleus, plastid | 31.28 | 32.51 |
| GSMUA_Achr6P27250_001 | Banana | cytosol, extracellular, nucleus | 35.55 | 32.33 |
| PGSC0003DMT400040074 | Potato | nucleus | 37.91 | 32.26 |
| Solyc02g062760.2.1 | Tomato | nucleus | 37.44 | 31.1 |
| TraesCS3B01G269000.1 | Wheat | cytosol, extracellular, nucleus | 32.7 | 30.8 |
| GSMUA_Achr7P25620_001 | Banana | nucleus | 33.65 | 30.47 |
| Zm00001d043969_P001 | Maize | endoplasmic reticulum | 33.65 | 30.47 |
| TraesCS3D01G241100.1 | Wheat | cytosol, extracellular, nucleus | 33.18 | 30.43 |
| HORVU3Hr1G059870.2 | Barley | cytosol, extracellular, nucleus | 33.18 | 30.17 |
| TraesCS3A01G240800.1 | Wheat | cytosol, extracellular, nucleus | 33.18 | 29.91 |
| KRH43324 | Soybean | nucleus | 18.96 | 29.41 |
| Os05t0567900-00 | Rice | cytosol, extracellular, plastid | 34.6 | 29.2 |
| KXG33047 | Sorghum | extracellular | 33.65 | 29.1 |
| GSMUA_Achr3P31070_001 | Banana | cytosol, nucleus, plastid | 28.91 | 28.91 |
| EES19963 | Sorghum | mitochondrion, nucleus, vacuole | 31.28 | 28.82 |
| Os01t0662800-00 | Rice | cytosol, extracellular, nucleus | 32.7 | 28.51 |
| AT5G49300.1 | Thale cress | cytosol | 16.11 | 24.46 |
| AT5G26930.1 | Thale cress | cytosol | 13.27 | 23.33 |
| AT3G06740.1 | Thale cress | nucleus | 15.17 | 21.48 |
| AT3G16870.1 | Thale cress | nucleus | 15.17 | 16.84 |
| AT4G16141.1 | Thale cress | cytosol | 14.22 | 15.23 |
| AT4G26150.1 | Thale cress | cytosol | 22.75 | 13.64 |
| AT5G56860.1 | Thale cress | nucleus | 21.8 | 11.56 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | EntrezGene:829814 | UniProt:A0A178V0H9 | ProteinID:AAS45431.1 | EMBL:AB493721 |
| ProteinID:AEE86678.1 | ArrayExpress:AT4G36620 | EnsemblPlantsGene:AT4G36620 | RefSeq:AT4G36620 | TAIR:AT4G36620 | RefSeq:AT4G36620-TAIR-G |
| EnsemblPlants:AT4G36620.1 | TAIR:AT4G36620.1 | EMBL:BT029506 | UniProt:C0SVL8 | ProteinID:CAB16831.1 | ProteinID:CAB80328.1 |
| Symbol:GATA19 | GO:GO:0000003 | GO:GO:0000977 | GO:GO:0001085 | GO:GO:0001228 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005667 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006366 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0045944 | GO:GO:0046872 | InterPro:IPR000679 | InterPro:IPR013088 | RefSeq:NP_195380.1 |
| ProteinID:OAO99253.1 | PFAM:PF00320 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | ScanProsite:PS00344 |
| PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF305 | UniProt:Q6QPM2 | SMART:SM00401 | SUPFAM:SSF57716 |
| UniParc:UPI00000A42F3 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : | : |
Description
GATA19Uncharacterized protein At4g36620 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVL8]
Coordinates
chr4:-:17268689..17269999
Molecular Weight (calculated)
23320.5 Da
IEP (calculated)
7.289
GRAVY (calculated)
-0.809
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSMFFSPE NDVSHHSSPY ASVDCTLSLG TPSTRLCNED DERRFSSHTS DTIGWDFLNG SKKGGGGGGH NLLARRCANC DTTSTPLWRN GPRGPKSLCN
101: ACGIRFKKEE RRASTARNST SGGGSTAAGV PTLDHQASAN YYYNNNNQYA SSSPWHHQHN TQRVPYYSPA NNEYSYVDDV RVVDHDVTTD PFLSWRLNVA
201: DRTGLVHDFT M
101: ACGIRFKKEE RRASTARNST SGGGSTAAGV PTLDHQASAN YYYNNNNQYA SSSPWHHQHN TQRVPYYSPA NNEYSYVDDV RVVDHDVTTD PFLSWRLNVA
201: DRTGLVHDFT M
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.