Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68462 | Soybean | cytosol | 71.08 | 73.75 |
| VIT_14s0060g01520.t01 | Wine grape | nucleus | 67.47 | 45.16 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 50.6 | 33.33 |
| KRH02314 | Soybean | nucleus | 55.42 | 32.86 |
| GSMUA_Achr3P00700_001 | Banana | nucleus | 48.19 | 32.26 |
| Os01t0976800-01 | Rice | nucleus | 51.81 | 30.28 |
| KRH50773 | Soybean | nucleus | 55.42 | 29.11 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 51.81 | 28.86 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 48.19 | 28.17 |
| TraesCS3A01G538400.1 | Wheat | nucleus | 53.01 | 26.19 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 44.58 | 26.06 |
| KXG32453 | Sorghum | nucleus | 37.35 | 24.8 |
| TraesCS3D01G544000.1 | Wheat | nucleus | 53.01 | 24.58 |
| Zm00001d037605_P001 | Maize | nucleus | 42.17 | 24.48 |
| TraesCS3B01G603900.1 | Wheat | nucleus | 53.01 | 24.44 |
| EER93149 | Sorghum | nucleus | 45.78 | 24.2 |
| TraesCS5D01G508800.1 | Wheat | nucleus | 46.99 | 24.07 |
| HORVU5Hr1G116310.1 | Barley | nucleus | 46.99 | 24.07 |
| Os01t0343300-01 | Rice | nucleus | 37.35 | 23.66 |
| TraesCS5B01G508800.1 | Wheat | nucleus | 46.99 | 23.35 |
| Zm00001d034751_P001 | Maize | nucleus | 45.78 | 23.31 |
| TraesCS1D01G106100.1 | Wheat | cytosol | 39.76 | 22.6 |
| TraesCS1B01G126600.1 | Wheat | cytosol | 39.76 | 22.6 |
| Zm00001d009193_P001 | Maize | plastid | 37.35 | 22.3 |
| KXG21349 | Sorghum | cytosol | 40.96 | 21.79 |
| TraesCS4A01G364700.1 | Wheat | nucleus | 46.99 | 21.55 |
| TraesCS1A01G097300.1 | Wheat | cytosol | 39.76 | 20.75 |
| Zm00001d040775_P001 | Maize | nucleus | 36.14 | 20.41 |
| Zm00001d011771_P001 | Maize | nucleus | 45.78 | 19.49 |
| EES04307 | Sorghum | nucleus | 50.6 | 19.35 |
| HORVU6Hr1G093630.3 | Barley | mitochondrion | 27.71 | 17.16 |
| Os05t0155400-01 | Rice | mitochondrion, nucleus, vacuole | 39.76 | 17.1 |
| KRH30068 | Soybean | plastid | 28.92 | 15.38 |
| HORVU1Hr1G022710.3 | Barley | plastid | 39.76 | 15.28 |
| KRH43324 | Soybean | nucleus | 19.28 | 11.76 |
| KRH69915 | Soybean | nucleus | 33.73 | 11.11 |
| KRH12382 | Soybean | nucleus | 42.17 | 11.11 |
| KRH37384 | Soybean | nucleus | 44.58 | 10.98 |
| KRH61505 | Soybean | nucleus | 38.55 | 10.96 |
| KRH08269 | Soybean | nucleus | 32.53 | 10.76 |
| KRH28681 | Soybean | nucleus | 31.33 | 10.61 |
| KRH19153 | Soybean | nucleus | 39.76 | 10.51 |
| KRH02716 | Soybean | nucleus | 39.76 | 10.25 |
| KRH15535 | Soybean | nucleus | 37.35 | 10.13 |
| KRH05458 | Soybean | nucleus | 37.35 | 10.13 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | EMBL:ACUP02012162 | EnsemblPlantsGene:GLYMA_19G229900 | GO:GO:0000977 | GO:GO:0001085 |
| GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005667 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0045944 |
| GO:GO:0046872 | InterPro:IPR000679 | InterPro:IPR013088 | UniProt:K7MZU9 | EnsemblPlants:KRG96744 | ProteinID:KRG96744 |
| ProteinID:KRG96744.1 | PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF306 |
| SMART:SM00401 | SUPFAM:SSF57716 | UniParc:UPI000294D141 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg |
Description
hypothetical protein
Coordinates
chr19:+:48080649..48080978
Molecular Weight (calculated)
9675.8 Da
IEP (calculated)
10.492
GRAVY (calculated)
-1.220
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MMDLKEWSSS SEELNVNRKC CADCKTTKTP LWRGGPAGPK TLCNACGIRY RKRRACWRKG ELKKQKQKQK QRWKMLGEEE QAA
001: MLDPTEKVID SESMESKLTS VDAIEEHSSS SSNEAISNEK KSCAICGTSK TPLWRGGPAG PKSLCNACGI RNRKKRRTLI SNRSEDKKKK SHNRNPKFGD
101: SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
101: SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
Arabidopsis Description
GATA15GATA transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.