Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G173000.1 | Wheat | cytosol | 87.79 | 88.3 |
| TraesCS6A01G185900.1 | Wheat | cytosol | 87.5 | 88.01 |
| TraesCS6B01G214900.1 | Wheat | cytosol | 84.59 | 85.09 |
| Os02t0220400-01 | Rice | nucleus | 63.66 | 62.04 |
| GSMUA_Achr7P09030_001 | Banana | nucleus | 23.84 | 52.56 |
| Zm00001d016361_P001 | Maize | nucleus | 56.4 | 52.43 |
| KXG29816 | Sorghum | nucleus | 56.4 | 50.13 |
| HORVU7Hr1G086810.1 | Barley | nucleus | 50.29 | 48.06 |
| GSMUA_Achr2P16730_001 | Banana | nucleus | 26.45 | 43.75 |
| VIT_04s0008g01290.t01 | Wine grape | plastid | 29.94 | 33.66 |
| VIT_11s0016g02210.t01 | Wine grape | nucleus, plastid | 29.94 | 33.33 |
| KRH02716 | Soybean | nucleus | 27.91 | 29.81 |
| Solyc07g038160.2.1 | Tomato | nucleus | 22.67 | 29.32 |
| KRH19153 | Soybean | nucleus | 26.74 | 29.3 |
| Bra035633.1-P | Field mustard | nucleus | 25.29 | 28.9 |
| PGSC0003DMT400000761 | Potato | nucleus | 23.26 | 27.87 |
| PGSC0003DMT400011449 | Potato | nucleus | 22.97 | 27.62 |
| Solyc12g008830.1.1 | Tomato | nucleus | 22.67 | 26.62 |
| HORVU5Hr1G116310.1 | Barley | nucleus | 12.5 | 26.54 |
| KRH12382 | Soybean | nucleus | 24.13 | 26.35 |
| AT4G26150.1 | Thale cress | cytosol | 26.74 | 26.14 |
| KRH61505 | Soybean | nucleus | 22.09 | 26.03 |
| CDX94365 | Canola | nucleus | 26.74 | 25.56 |
| Bra026461.1-P | Field mustard | nucleus | 26.74 | 25.56 |
| CDX89358 | Canola | nucleus | 26.45 | 25.28 |
| CDY42752 | Canola | nucleus | 26.74 | 24.86 |
| CDY42753 | Canola | nucleus | 26.74 | 24.86 |
| KRH15535 | Soybean | nucleus | 22.09 | 24.84 |
| CDY67979 | Canola | nucleus | 27.62 | 24.23 |
| CDY20709 | Canola | nucleus | 27.62 | 24.11 |
| CDY67546 | Canola | nucleus | 26.16 | 23.94 |
| KRH05458 | Soybean | nucleus | 21.22 | 23.86 |
| Bra002788.1-P | Field mustard | nucleus | 26.74 | 23.77 |
| CDY32755 | Canola | nucleus | 26.74 | 23.77 |
| CDY32891 | Canola | nucleus | 26.74 | 23.71 |
| Bra019118.1-P | Field mustard | nucleus | 26.45 | 23.45 |
| KRH37384 | Soybean | nucleus | 22.97 | 23.44 |
| CDX88593 | Canola | nucleus | 23.84 | 23.1 |
| AT5G56860.1 | Thale cress | nucleus | 26.45 | 22.86 |
| CDY65439 | Canola | nucleus | 24.71 | 22.14 |
| Bra006851.1-P | Field mustard | nucleus, plastid | 24.71 | 22.14 |
| HORVU6Hr1G093630.3 | Barley | mitochondrion | 8.43 | 21.64 |
| HORVU3Hr1G059870.2 | Barley | cytosol, extracellular, nucleus | 14.53 | 21.55 |
| Bra001644.1-P | Field mustard | nucleus | 8.72 | 20.55 |
| HORVU1Hr1G091450.3 | Barley | plastid | 11.63 | 18.43 |
| HORVU1Hr1G022710.3 | Barley | plastid | 11.05 | 17.59 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009646 |
| GO:GO:0009658 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009739 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009909 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0043565 | GO:GO:0046872 | GO:GO:0099402 |
| GO:GO:1901698 | EnsemblPlantsGene:HORVU6Hr1G039720 | EnsemblPlants:HORVU6Hr1G039720.2 | InterPro:IPR000679 | InterPro:IPR013088 | UniProt:M0YMG4 |
| PFAM:PF00320 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF287 | SMART:SM00401 |
| SUPFAM:SSF57716 | UniParc:UPI0002949D0E | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg | : |
Description
Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0YMG4]
Coordinates
chrchr6H:-:207779020..207792235
Molecular Weight (calculated)
36894.8 Da
IEP (calculated)
9.001
GRAVY (calculated)
-0.496
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDSAQTKAK KLSTLPLMDG DQDQGHFQAF HLPKDPPILF PFMIDNPVDH QGQGCGDQHS GQHLFGESSQ QFNDRMMMGG GSADVFATCS PFGPTIQSIG
101: SDMIQRSSYN SYDFEATHAS DGSTSQWASA KPPVKMRIMR KAPTNDPQGG MVRKPRRRAQ AHQADESQQL QHAMGVIRVC SDCNTTKTPL WRSGPCGPKS
201: LCNACGIRQR KVRRAMAAAA ATGANGGVAS ASSGGVASGG VQTSEASQAV KATKKEKRAA DLDRSLPFKK RCKMVDHPTV TSTKVVAVDA TPKHQDHVVS
301: EDVATVERLS KADPPAAFTH VFVRDEITDA AMLLMTLSCG LVRS
101: SDMIQRSSYN SYDFEATHAS DGSTSQWASA KPPVKMRIMR KAPTNDPQGG MVRKPRRRAQ AHQADESQQL QHAMGVIRVC SDCNTTKTPL WRSGPCGPKS
201: LCNACGIRQR KVRRAMAAAA ATGANGGVAS ASSGGVASGG VQTSEASQAV KATKKEKRAA DLDRSLPFKK RCKMVDHPTV TSTKVVAVDA TPKHQDHVVS
301: EDVATVERLS KADPPAAFTH VFVRDEITDA AMLLMTLSCG LVRS
001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
Arabidopsis Description
GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.