Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 80.28 | 64.04 |
| GSMUA_Achr1P27690_001 | Banana | mitochondrion | 76.06 | 26.87 |
| GSMUA_Achr8P33940_001 | Banana | cytosol | 63.38 | 8.64 |
| Solyc02g062000.2.1 | Tomato | cytosol | 53.52 | 8.15 |
| PGSC0003DMT400009233 | Potato | cytosol | 56.34 | 7.59 |
| GSMUA_Achr1P27590_001 | Banana | cytosol, nucleus, plastid | 12.68 | 5.81 |
| PGSC0003DMT400061372 | Potato | cytosol | 29.58 | 4.46 |
| GSMUA_Achr5P22350_001 | Banana | cytosol | 15.49 | 1.02 |
| GSMUA_Achr7P20360_001 | Banana | extracellular | 1.41 | 0.96 |
| GSMUA_Achr7P20370_001 | Banana | nucleus | 11.27 | 0.77 |
| GSMUA_Achr1P27620_001 | Banana | cytosol | 1.41 | 0.75 |
| GSMUA_Achr1P26420_001 | Banana | cytosol | 0.0 | 0.0 |
| VIT_04s0023g03900.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_04s0023g03920.t01 | Wine grape | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P27610_001 | EnsemblPlants:GSMUA_Achr1T27610_001 | EnsemblPlantsGene:GSMUA_Achr1G27610_001 | SEG:seg | UniParc:UPI000295F4C7 | UniProt:M0S3L8 |
| MapMan:35.2 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G27610_001]
Coordinates
chr1:-:24918701..24919271
Molecular Weight (calculated)
7859.3 Da
IEP (calculated)
4.433
GRAVY (calculated)
-0.166
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MEGIFFSLLE NDLEELNKNH KLGSNSDESW KPMREVACPI CTVHLQVQVP ASGSQTIECG VCQHPFLVSA D
001: MVSDLPLDED DIALLKSPYI GEIVEEIGFV REKRIAHCIV QCDDGGDEDV NSAPNIFTYD NVPLKKRHYL GTSDTFRSFE PLNEHACIVC DIADDGVVPC
101: SGNECPLAVH RKCVELDCED PATFYCPYCW FKEQATRSTA LRTRGVAAAK TLVQYGCSEL RSGDIVMTRE NSQLENGSDN SLPMQLHENL HQLQELVKHL
201: KARNSQLDES TDQFIDMEKS CGEAYAVVND QPKRVLWTVN EEKMLREGVE KFSDTINKNM PWKKILEMGK EIGDQNGEGK KRRSDEEDES NRNHPKIRIC
301: GMVFVKPIT
101: SGNECPLAVH RKCVELDCED PATFYCPYCW FKEQATRSTA LRTRGVAAAK TLVQYGCSEL RSGDIVMTRE NSQLENGSDN SLPMQLHENL HQLQELVKHL
201: KARNSQLDES TDQFIDMEKS CGEAYAVVND QPKRVLWTVN EEKMLREGVE KFSDTINKNM PWKKILEMGK EIGDQNGEGK KRRSDEEDES NRNHPKIRIC
301: GMVFVKPIT
Arabidopsis Description
Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HQJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.