Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031405.1-P | Field mustard | cytosol | 6.98 | 65.79 |
| GSMUA_Achr7P20370_001 | Banana | nucleus | 57.08 | 58.66 |
| TraesCS5D01G485400.1 | Wheat | cytosol, plastid | 48.23 | 47.48 |
| TraesCS5B01G485600.1 | Wheat | cytosol, plastid | 47.95 | 47.33 |
| Zm00001d017029_P001 | Maize | cytosol | 46.55 | 46.82 |
| TraesCS5A01G472700.3 | Wheat | cytosol | 48.23 | 46.71 |
| Os03t0669800-01 | Rice | plasma membrane | 40.04 | 46.14 |
| CDY52319 | Canola | plastid | 43.02 | 45.88 |
| CDY25311 | Canola | cytosol, plastid | 43.95 | 45.69 |
| EES05335 | Sorghum | plastid | 46.65 | 45.42 |
| PGSC0003DMT400055915 | Potato | cytosol | 44.13 | 45.36 |
| Solyc02g079850.2.1 | Tomato | cytosol | 39.57 | 43.41 |
| OQU88236 | Sorghum | nucleus | 41.71 | 42.38 |
| AT1G61690.1 | Thale cress | cytosol | 43.39 | 39.8 |
| KRH41976 | Soybean | cytosol | 45.9 | 39.28 |
| KRH49913 | Soybean | cytosol | 45.72 | 39.19 |
| Bra031406.1-P | Field mustard | nucleus | 31.47 | 37.02 |
| VIT_00s0361g00100.t01 | Wine grape | cytosol | 38.17 | 36.61 |
| GSMUA_Achr1P27590_001 | Banana | cytosol, nucleus, plastid | 2.61 | 18.06 |
| GSMUA_Achr1P27620_001 | Banana | cytosol | 2.14 | 17.29 |
| GSMUA_Achr1P27610_001 | Banana | cytosol | 1.02 | 15.49 |
| GSMUA_Achr1P27690_001 | Banana | mitochondrion | 2.89 | 15.42 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 1.12 | 13.48 |
| GSMUA_Achr8P33940_001 | Banana | cytosol | 5.87 | 12.09 |
| GSMUA_Achr7P20360_001 | Banana | extracellular | 1.12 | 11.54 |
| GSMUA_Achr1P26420_001 | Banana | cytosol | 5.31 | 11.26 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr5G22350_001 | EnsemblPlants:GSMUA_Achr5P22350_001 | EnsemblPlants:GSMUA_Achr5T22350_001 | InterPro:IPR011990 | InterPro:IPR013083 |
| InterPro:IPR017455 | InterPro:IPR019734 | UniProt:M0T0R0 | PFAM:PF01363 | PFscan:PS50178 | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF469 | SMART:SM00028 | SMART:SM00064 | SUPFAM:SSF48452 | SUPFAM:SSF57903 | InterPro:TPR-like_helical_dom_sf |
| InterPro:TPR_repeat | UniParc:UPI000294DD9A | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G22350_001]
Coordinates
chr5:-:24431582..24437592
Molecular Weight (calculated)
119569.0 Da
IEP (calculated)
5.280
GRAVY (calculated)
-0.816
Length
1074 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLEKIGLPAK PSMRGGSWVL DASHCQGCAS QFTFINRKHH CRRCGGLFCN TCTQQRMVLR GQGDSAVRIC DPCKKIEETA RFQSRYGHRK QTAKVNTKQV
0101: LKNEEEVLGQ ILGTDGKHLL LSEQESDSDV ISDLQRLSSS ASCSNLREES ASSGKEEDIV RGMSVDTCNK ANIDIMLGDP EELRHQAVEE KRKYKTLKAE
0201: GKSEEALQAF KRGKELERQA GALEIAIRKN QRMALKASNM RTVTANPKSD GREESDSKQK LPSQRDKEAK NDLAAELREL GWSDVDLHNA DKKPEKLSLE
0301: GELSNLLAEV TQRSSQGMKK GAIDKSEVLA LKKKALSLKR EGKLAEAKEE LKRAKILEKK IEEQEILGEA EGSDDELYAL INSMDEDKQD ELVLDHAPEA
0401: NIKFDNLLVF SDDLPADGNF EVTDNDMNDP ELAAALKSFG WSEEDEEQVA SQDEQSVPFD REALQSQVLS LKKEALSQKR AGNVSKALEI LKKAKLLEKD
0501: LETMKSSPEI SESEFKQKSL SRQVNVSETT SSHFESPPKS KLMIQKELLA LKKRALTLRR EGRIDEAEEE LKKGKVLEQQ LEEMENASRR PEPKLVKNNL
0601: EFAKTYEGGD ARSLDLGEEG FETEVTEHDM CDPAMLSLLK NLGWNEDDNA ENVSMTNITS KRMNEPSLVP PKVKKNKADI QKELLAIKRK ALALRRQGKS
0701: EEAEEELEKA KALENQMAEM EVSNEAVLVQ GVSDVGLNAK SDKNKAAEAS VMVPKILQTE KQMLQKSGLQ TEEISVEDPI LHQESVKGED TDANEKSCSG
0801: SSKLSCTIDF QISQRNETNA TGTNISAAQK QNLTHGVDAL QDEILALKRR AVALKREGKL AEAREELRQA KLLEKSLEDG QQANVVKEGA SSSTSDNTSS
0901: MQEKRTSPSA KPMSGRDRFR IQQESLSHKR NALKLRREGK IDESEAELEL AKALEKQLEE FDQGSSTMMS GSKSEAMEDV VVEDLLDPQL MSALKAIGLE
1001: GPAITSQPQP HNKTESQPNF DKRENHGIEK AALEEQIKAE KLRALDFKRA GKQAEALEAL RSAKRLEKKL ASLT
0101: LKNEEEVLGQ ILGTDGKHLL LSEQESDSDV ISDLQRLSSS ASCSNLREES ASSGKEEDIV RGMSVDTCNK ANIDIMLGDP EELRHQAVEE KRKYKTLKAE
0201: GKSEEALQAF KRGKELERQA GALEIAIRKN QRMALKASNM RTVTANPKSD GREESDSKQK LPSQRDKEAK NDLAAELREL GWSDVDLHNA DKKPEKLSLE
0301: GELSNLLAEV TQRSSQGMKK GAIDKSEVLA LKKKALSLKR EGKLAEAKEE LKRAKILEKK IEEQEILGEA EGSDDELYAL INSMDEDKQD ELVLDHAPEA
0401: NIKFDNLLVF SDDLPADGNF EVTDNDMNDP ELAAALKSFG WSEEDEEQVA SQDEQSVPFD REALQSQVLS LKKEALSQKR AGNVSKALEI LKKAKLLEKD
0501: LETMKSSPEI SESEFKQKSL SRQVNVSETT SSHFESPPKS KLMIQKELLA LKKRALTLRR EGRIDEAEEE LKKGKVLEQQ LEEMENASRR PEPKLVKNNL
0601: EFAKTYEGGD ARSLDLGEEG FETEVTEHDM CDPAMLSLLK NLGWNEDDNA ENVSMTNITS KRMNEPSLVP PKVKKNKADI QKELLAIKRK ALALRRQGKS
0701: EEAEEELEKA KALENQMAEM EVSNEAVLVQ GVSDVGLNAK SDKNKAAEAS VMVPKILQTE KQMLQKSGLQ TEEISVEDPI LHQESVKGED TDANEKSCSG
0801: SSKLSCTIDF QISQRNETNA TGTNISAAQK QNLTHGVDAL QDEILALKRR AVALKREGKL AEAREELRQA KLLEKSLEDG QQANVVKEGA SSSTSDNTSS
0901: MQEKRTSPSA KPMSGRDRFR IQQESLSHKR NALKLRREGK IDESEAELEL AKALEKQLEE FDQGSSTMMS GSKSEAMEDV VVEDLLDPQL MSALKAIGLE
1001: GPAITSQPQP HNKTESQPNF DKRENHGIEK AALEEQIKAE KLRALDFKRA GKQAEALEAL RSAKRLEKKL ASLT
0001: MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
Arabidopsis Description
At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.