CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41976	Soybean	cytosol	82.44	82.31
Bra031405.1-P	Field mustard	cytosol	6.54	71.93
CDY52319	Canola	plastid	39.11	48.66
PGSC0003DMT400055915	Potato	cytosol	40.22	48.23
CDY25311	Canola	cytosol, plastid	38.71	46.95
Solyc02g079850.2.1	Tomato	cytosol	36.47	46.68
GSMUA_Achr5P22350_001	Banana	cytosol	39.19	45.72
AT1G61690.1	Thale cress	cytosol	42.38	45.35
Zm00001d017029_P001	Maize	cytosol	35.91	42.13
GSMUA_Achr7P20370_001	Banana	nucleus	34.24	41.05
TraesCS5D01G485400.1	Wheat	cytosol, plastid	35.59	40.88
TraesCS5B01G485600.1	Wheat	cytosol, plastid	35.28	40.62
EES05335	Sorghum	plastid	35.67	40.53
TraesCS5A01G472700.3	Wheat	cytosol	35.51	40.13
Os03t0669800-01	Rice	plasma membrane	28.81	38.73
VIT_00s0361g00100.t01	Wine grape	cytosol	34.08	38.12
OQU88236	Sorghum	nucleus	29.93	35.48
KRH45071	Soybean	cytosol, nucleus, plastid	1.04	17.11
KRH05975	Soybean	cytosol	2.71	10.4
KRH61022	Soybean	nucleus	4.15	9.9
KRH51684	Soybean	cytosol	4.23	9.67
KRH17455	Soybean	extracellular	1.12	8.7

Protein Annotations

EntrezGene:100781939	Gene3D:3.30.40.10	MapMan:35.2	UniProt:A0A0R0JB68	EMBL:ACUP02004646	ncoils:Coil
EnsemblPlantsGene:GLYMA_07G187500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046872	InterPro:IPR011990
InterPro:IPR013083	InterPro:IPR017455	InterPro:IPR019734	EnsemblPlants:KRH49913	ProteinID:KRH49913	ProteinID:KRH49913.1
PFAM:PF01363	PFscan:PS50178	PANTHER:PTHR22835	PANTHER:PTHR22835:SF469	SMART:SM00028	SMART:SM00064
SUPFAM:SSF48452	SUPFAM:SSF57903	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0003DEB7A9	InterPro:Znf_FYVE
InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:+:35482876..35488426

Molecular Weight (calculated)

139387.0 Da

IEP (calculated)

5.553

GRAVY (calculated)

-0.797

Length

1253 amino acids

Sequence
(BLAST)

0001: MLEKIGLPPK PSLRGNTWVV DASHCQGCSS QFTFINRKHH CRRCGGIFCG SCTQQRMVLR GQGDSPVRIC EPCKKLEEAA RFELRHGRRP GRGSLKSAPR
0101: DEEEVLNQIL GQASGEVPSR QRSIGIASSS SNSNFDEDIQ KIVSNDKPNV LGIDLESTTP DELRKQALEE KKKHKILKGE GKSDEALRAF KRGKELERQA
0201: DALEIQLRKS RKKSLPSGNL SDMLNKGIPA ESDRKTKSLS HVGRVKDDLT SELRELGWSD MDLHNEDKKS SNLSLEGELS SLIGEVFTKT GEQKGSKIDK
0301: SQVVALKKNA LMLKREGKLA EAKEELKRAK ILEKELEEQE LLAEAEDSDD ELSALIRGMN DDKELSNLHD HGDGFDFERL LAIPDDLHGN FEVTDEDMMD
0401: PAIAGALESL GWTEPENTSS QSQTFDKEEL LSEIQSLKRE ALNQKRAGNA EEAMTFLKKA KLLERGLNSS GPEDYNTMSQ KSTAVRKGVS SEIAGNGSDS
0501: IQLDERNTSA TNNVASRVAP KSRLMIQREL LSLKKKALTL RREGKMNEAE EEMQKGAALE RQLMEMDKAS NVTISRTNTT DNVPHTAHME ADFSRNLPLE
0601: EGSEDDVTDQ DMSDPTYLSF LRDLGWNDDN NDLSNSPSKP LKKDDDHFVP VNDASLSKHS TNILVQAPRS KAEIQRELLG LKRKALAFRR EGKAEDAEEV
0701: LKMAKALEAQ MAEMDAAKSK AQVEATVMKD RLFNPPVDEE RDMVVSEQDM HDPTLNSMLT NLGWKDDESE PMTIKEEPVK EATVRSKHTV DLSALDSSSG
0801: IPATALRSKG EIQRELLTLK RKALALRRKG EIEEAEEILR QSKTLEAQIE DFANQNKYLS LNVSMDEQSV LSESSVFQER LGSLGVATEV DNASASSVVW
0901: SNGKHSLSAD GSTSSENLSK KMKAEKIIGH SSSAGHSMDM VDLLASDDSN MSEIFTQKHK EYKLCSANSS QADPTIHLDT SVNFNQDRGF KNSDTTQKRE
1001: VIDAIEKPNI NKPNAVQDNA SQHLLTLRQE ILAHKRKAVT LKREGKLTEA KEELRQAKLL EKGLEDGSMQ PDTASASVKN VVQKKQELSN VSAKPLSSRD
1101: RFKLQQESLG HKRQALKLRR EGRIEEAEAL FERAKAIETQ LEELTAQDSN KSDGVDDVTV EDFLDPQLLS ALKAVGLDDV SVVSKAPERE ETVKSNAKVE
1201: NSNQERIQLE ERIKEEKVKA LNLKRSGKQA EALDALRRAK LYEKKLNSLT SGS

Best Arabidopsis Sequence Match ( AT1G61690.1 )
(BLAST)

0001: MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S

Arabidopsis Description

At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.