CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P27690_001	Banana	mitochondrion	52.63	19.9
GSMUA_Achr1P27590_001	Banana	cytosol, nucleus, plastid	35.53	17.42
KRH05975	Soybean	cytosol	65.79	15.29
GSMUA_Achr1P27620_001	Banana	cytosol	23.68	13.53
KRH51684	Soybean	cytosol	80.26	11.13
KRH61022	Soybean	nucleus	75.0	10.86
CDY37424	Canola	extracellular	39.47	10.56
VIT_18s0001g14750.t01	Wine grape	cytosol	68.42	8.89
OQU77119	Sorghum	cytosol	47.37	7.16
Solyc04g081750.2.1	Tomato	cytosol	52.63	7.1
PGSC0003DMT400025563	Potato	cytosol	52.63	7.1
GSMUA_Achr8P33940_001	Banana	cytosol	47.37	6.91
TraesCS7D01G528300.1	Wheat	cytosol	46.05	6.88
Os06t0724100-01	Rice	cytosol	43.42	6.76
TraesCS2A01G184400.2	Wheat	cytosol	43.42	6.57
TraesCS2B01G223000.1	Wheat	cytosol	42.11	6.37
TraesCS2D01G203300.1	Wheat	cytosol	42.11	6.37
HORVU2Hr1G037770.2	Barley	cytosol	42.11	6.37
EER97421	Sorghum	cytosol	44.74	6.37
Zm00001d021878_P003	Maize	cytosol	44.74	6.27
Os07t0573300-01	Rice	cytosol	42.11	6.19
KRH17455	Soybean	extracellular	2.63	1.24
KRH49913	Soybean	cytosol	17.11	1.04
KRH41976	Soybean	cytosol	17.11	1.04
Zm00001d014808_P001	Maize	extracellular	3.95	0.79
GSMUA_Achr1P26420_001	Banana	cytosol	5.26	0.79

Protein Annotations

EMBL:ACUP02004986	EnsemblPlants:KRH45071	EnsemblPlantsGene:GLYMA_08G248500	ncoils:Coil	ProteinID:KRH45071	ProteinID:KRH45071.1
UniParc:UPI0006EDE5A1	UniProt:A0A0R0J1P7	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:21612541..21614727

Molecular Weight (calculated)

8278.8 Da

IEP (calculated)

8.069

GRAVY (calculated)

-0.657

Length

76 amino acids

Sequence
(BLAST)

1: MKTISILLPL NNDTHGEVTQ RLTSAKESSS KPALQSHEDL AKKLQEELER NQKASGSKSD GCARQVKEVA CPICTV

Best Arabidopsis Sequence Match ( AT1G20110.1 )
(BLAST)

001: MQQGDYNSYY HHQYSQFQNP TPNPNPNPNP SPPAPATVAG PTDLTRNTYA SAPPFTGGYG SADYSNYSQN YTPYGQNSEH VPPSAPSFTS PSQPPPSPPA
101: TSLNPNSYST FNQPPPPPTI HPQPLSSYGS FDSTAPYQQP TSQHMYYSPY DQHQTSGYSS APPPSSAPAP NPNPAPYSSS LYSAPPYSSG GSSIPPSYEK
201: PSVKFDQSGY DGYNRSRSDL GSDLYGKRSD SGEYPAFEDS YGDGVYAYQG GKVEPYGSRG TAPKSSNSTL FDDYGRSISF SSSGRDSSVS SNSAKIVRAV
301: PKADVQEDST GGVQKFRVKL LAETYGQTTT DVLCQIGLDG LRMLDPSTSR TLRIYPLENI TRCEKLDSSI LAFWSKTPVD IEAKRIRLQS NSYTTNTLLD
401: TVTAAMFQAK EIGGSSRPPT SGKLIEQTAE KKKGLGDWMN IIKPVNEEKD HWVPDEAVSK CTSCGSDFGA FIRRHHCRNC GDVFCDKCTQ GRIALTAEDN
501: APQVRVCDRC MAEVSQRLSN AKETTGRNVS LQSHEDLARK LQEEMERNRK SSSGLREGSG RRMKEVACPT CTVHLQVQVP VSGSETIECG VCQNPFLVSA
601: H

Arabidopsis Description

FREE1Protein FREE1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.