CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49913	Soybean	cytosol	82.31	82.44
Bra031405.1-P	Field mustard	cytosol	6.45	71.05
CDY52319	Canola	plastid	39.04	48.66
PGSC0003DMT400055915	Potato	cytosol	40.32	48.42
CDY25311	Canola	cytosol, plastid	39.2	47.63
Solyc02g079850.2.1	Tomato	cytosol	36.33	46.58
GSMUA_Achr5P22350_001	Banana	cytosol	39.28	45.9
AT1G61690.1	Thale cress	cytosol	42.23	45.26
Zm00001d017029_P001	Maize	cytosol	36.41	42.79
TraesCS5B01G485600.1	Wheat	cytosol, plastid	35.78	41.27
TraesCS5D01G485400.1	Wheat	cytosol, plastid	35.86	41.25
EES05335	Sorghum	plastid	36.18	41.16
GSMUA_Achr7P20370_001	Banana	nucleus	34.1	40.96
TraesCS5A01G472700.3	Wheat	cytosol	36.02	40.76
Os03t0669800-01	Rice	plasma membrane	29.72	40.02
OQU88236	Sorghum	nucleus	31.08	36.9
VIT_00s0361g00100.t01	Wine grape	cytosol	32.83	36.79
KRH45071	Soybean	cytosol, nucleus, plastid	1.04	17.11
KRH05975	Soybean	cytosol	2.71	10.4
KRH61022	Soybean	nucleus	4.06	9.71
KRH51684	Soybean	cytosol	4.14	9.49
KRH17455	Soybean	extracellular	1.12	8.7

Protein Annotations

EntrezGene:100815489	Gene3D:3.30.40.10	MapMan:35.2	UniProt:A0A0R0IP82	EMBL:ACUP02004784	ncoils:Coil
EnsemblPlantsGene:GLYMA_08G061700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046872	InterPro:IPR011990
InterPro:IPR013083	InterPro:IPR017455	InterPro:IPR019734	EnsemblPlants:KRH41976	ProteinID:KRH41976	ProteinID:KRH41976.1
PFAM:PF01363	PFscan:PS50178	PANTHER:PTHR22835	PANTHER:PTHR22835:SF469	SMART:SM00028	SMART:SM00064
SUPFAM:SSF48452	SUPFAM:SSF57903	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0003DE7EED	InterPro:Znf_FYVE
InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:4757687..4763074

Molecular Weight (calculated)

139544.0 Da

IEP (calculated)

6.137

GRAVY (calculated)

-0.865

Length

1255 amino acids

Sequence
(BLAST)

0001: MLEKIGLPSK PSLRGNNWVV DASHCQGCSS QFTFINRKHH CRRCGGIFCG SCTRQRMVLR GQGDSPVRIC EPCKKLEEAA RFELRHGRRP GRGSLKSAPR
0101: DEDEVLNQIL GQTSDKVPSG QRSVGVASSS SNSNFDEDIQ KIVSNDKPNV LGIDLGSTTP DELRKQALEE KKKHKILKGE GKSDEALRAF KRGKELERQA
0201: DALEIQLRKS HKKSLPSGNL SDVLNKGIPA ESDRKTKSLS HVGREKNDLT SELRDLGWSD MDLHKEDKKS SNLSLEGELS SIIGEVFTKS GEQKGSKIDK
0301: SQVVALKKNA LMLKREGKLA EAKEELKRAK ILEKQLEEQE LLAEAEDSED ELSALIRGMD DGKELPNLHD RGHDFDFERL LAISDDLDGN FEVTEEDMMD
0401: PEIAGALESL GWTEPENTSS KSQTFDKEHL LSEIRFLKRE ALNQKRAGNT EEAMAFLKKA KLLERSLNSS EPEDYNSVSQ KSTAIRKSVS SEVAGKGSDS
0501: IHERNTSATN NVSSTVAPKS RLMIQRELLS LKKKALTLRR EGKMNEAEEE TQKGAALEQQ LMEMDKASNL KTSRTNTTDN VPHHNQADFH RNLSLEEGSE
0601: DDVTDRDMSD PTYLSLLREL GWNDDNNDNS PSKSLKKDDN HFAPVNDASL SKHSTNIRVQ APRSKTEIQR ELLGLKRKAL AFRREGKAED AEEVLKMAKA
0701: LEAQMEEMEA AKNKPQVEAT VTKDGLFNPP VDEERYMAVS EEDLHDPTLN SMLTNLGWKD DEFESVAIKE DPVKEATATH TVDLSAHDSS SGIPATASRS
0801: KGEIQRELLT LKRKALAFRR KGEIEEAEEI LRQAKTLEDQ MEAFGNWNKD LSLNVSKDQQ SVLSESSDYQ ERHGSLGVAT EVDNASASSV IWSNGKHSLS
0901: AEGSTSSENL SKKMKAEKNI GRSSSAGHST DMVDLLTGDG SNMSEILTKK HTEYKLGSAN SSHADPAIHL NSSVNFNQDR GFKNSDTTQK REVTDAIEKP
1001: NINESNAVQD NVFQHHLPLR QEILAHKRKA VTLKREGKLT EAKEELRQAK LLEKGLEDGN MLPDTASSSA SATVNYASHA SNVVQKKQES SNVSAKPLSS
1101: RDRFKLQQES LGHKRQALKL RREGQIEEAE ALFELAKAIE TQLEELTAQD SNKSEGVDDV AVEDFLDPQL LSALKAVGLD DVSVVSKPHP ERQETVKSNA
1201: KVENSNQERI QLEERIKEEK VKALNLKRSG KQAEALDALR RAKLYEKKLN SLTSG

Best Arabidopsis Sequence Match ( AT1G61690.1 )
(BLAST)

0001: MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S

Arabidopsis Description

At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.