CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25311	Canola	cytosol, plastid	85.8	83.64
Bra031406.1-P	Field mustard	nucleus	67.92	74.92
AT1G61690.1	Thale cress	cytosol	69.22	59.52
PGSC0003DMT400055915	Potato	cytosol	49.16	47.37
Solyc02g079850.2.1	Tomato	cytosol	45.08	46.37
GSMUA_Achr5P22350_001	Banana	cytosol	45.88	43.02
TraesCS5B01G485600.1	Wheat	cytosol, plastid	45.88	42.46
TraesCS5D01G485400.1	Wheat	cytosol, plastid	45.68	42.16
TraesCS5A01G472700.3	Wheat	cytosol	45.98	41.75
Zm00001d017029_P001	Maize	cytosol	43.99	41.48
EES05335	Sorghum	plastid	45.38	41.43
Os03t0669800-01	Rice	plasma membrane	37.84	40.88
KRH49913	Soybean	cytosol	48.66	39.11
KRH41976	Soybean	cytosol	48.66	39.04
GSMUA_Achr7P20370_001	Banana	nucleus	40.02	38.56
OQU88236	Sorghum	nucleus	37.64	35.86
VIT_00s0361g00100.t01	Wine grape	cytosol	39.62	35.62
CDY37424	Canola	extracellular	2.98	10.56
CDY29372	Canola	cytosol	2.09	10.4
CDY44204	Canola	cytosol	3.67	9.49
CDY54337	Canola	cytosol	5.16	9.34
CDY62935	Canola	cytosol	5.06	9.22
CDY43412	Canola	nucleus	3.97	7.3

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.2	GO:A0A078IS85	UniProt:A0A078IS85	EnsemblPlants:CDY52319	ProteinID:CDY52319
ProteinID:CDY52319.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00006746001	InterPro:IPR011990	InterPro:IPR013083	InterPro:IPR017455	InterPro:IPR019734	PFAM:PF01363
PFscan:PS50178	PANTHER:PTHR22835	PANTHER:PTHR22835:SF469	SMART:SM00028	SMART:SM00064	SUPFAM:SSF48452
SUPFAM:SSF57903	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EEA379	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel
InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

BnaA01g36180DBnaA01g36180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS85]

Coordinates

chrLK033078:-:31706..35426

Molecular Weight (calculated)

110806.0 Da

IEP (calculated)

5.139

GRAVY (calculated)

-0.846

Length

1007 amino acids

Sequence
(BLAST)

0001: MLEKIGLPAK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG SCTQQRMSLR GQGDSPVRIC DPCKQLEDAA RFELRHGYKN RSAKGTGGSK
0101: RTVKNEDDVL SEILGSDVDV SSSSESDRVT SKEMGSSSSM ELDATPEELR KQAVEEKNKY RVLKQQGKSE EALKAFKRGK ELERQADALE ISLRKDRKRA
0201: LSMRDVSAAT QKNKAATKES SKSQKPPRKD DLAAELRDLG WSDDEDKKPA TVSLEGEFSS LLREIPGRTT NPQQKSGGGI DKSQVIAIKK KALALKREGK
0301: LAEAKEELTR AKVLEREIEE QELLGGADES DDELSALINS MDDDKEDDLL AQYEGSHGFD IGNLVESVDD LGVDGAFDVT DEDMEDPAIA AALKSLGWAE
0401: DPGRRENLHT QSPPNNREER LAEIQALKRE ALTLKRAGNA AEALATLKKA KLLERELESA ADTSSQAADT SLNHPPRSRL AIQRELLAVK KKALTLKREG
0501: KFNEAEEELK KGAVLQEQLE ELDNSSKLAA AGKAIREKDM PDITVDSMDD DGEVDVKDED VEDDSVTEND MKDPALLSTL KNLGWEDEEP KKQEAAFSSM
0601: QSTGPRVAAK TKGQIQRELL DLKRKALAFK RQGKNGEADE VYSHAKVLEA QLAELETPKA EPMGEVSAST INYMDVDLLV GSSQMEDKAG KSASAAQGNY
0701: DMLGDFISPA KSDSLSTHGM SESRQPSMMD LLTGEQCERS QTVRREESAP GSFESASVEN TSPQNTLNQD ILAHKRKALA LKKEGKISEA KEALQQAKLL
0801: ERRLQEGENP SPEKLRRDDV VSATQPPVVR EKENSPSSSA APKPMSSRDR FKLQQESLSH KRQAMKLRRE GKMEEAEAEF EIAKTLEAQL EDSTSSKSEP
0901: VDDNVAVEDF LDPQLLSALK AIGLDSSVNA SASKPDTTQA TPKPVREAVK PSPAKESDSK QERMQLEERI KAEKIKAVTL KRSGKQAEAL DALRRAKLYE
1001: KKLNALA

Best Arabidopsis Sequence Match ( AT1G61690.1 )
(BLAST)

0001: MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S

Arabidopsis Description

At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.