Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05335 | Sorghum | plastid | 70.29 | 67.36 |
| TraesCS5D01G485400.1 | Wheat | cytosol, plastid | 61.02 | 59.12 |
| TraesCS5B01G485600.1 | Wheat | cytosol, plastid | 60.55 | 58.82 |
| TraesCS5A01G472700.3 | Wheat | cytosol | 60.45 | 57.62 |
| Os03t0669800-01 | Rice | plasma membrane | 48.34 | 54.83 |
| GSMUA_Achr5P22350_001 | Banana | cytosol | 42.38 | 41.71 |
| GSMUA_Achr7P20370_001 | Banana | nucleus | 38.32 | 38.76 |
| Solyc02g079850.2.1 | Tomato | cytosol | 35.57 | 38.41 |
| CDY52319 | Canola | plastid | 35.86 | 37.64 |
| PGSC0003DMT400055915 | Potato | cytosol | 36.71 | 37.13 |
| CDY25311 | Canola | cytosol, plastid | 35.76 | 36.59 |
| Bra031406.1-P | Field mustard | nucleus | 29.99 | 34.72 |
| AT1G61690.1 | Thale cress | cytosol | 35.86 | 32.37 |
| KRH41976 | Soybean | cytosol | 36.9 | 31.08 |
| KRH49913 | Soybean | cytosol | 35.48 | 29.93 |
| VIT_00s0361g00100.t01 | Wine grape | cytosol | 28.95 | 27.32 |
| OQU77119 | Sorghum | cytosol | 6.15 | 12.92 |
| EER97421 | Sorghum | cytosol | 6.53 | 12.92 |
| Bra031405.1-P | Field mustard | cytosol | 0.85 | 7.89 |
Protein Annotations
| EnsemblPlants:OQU88236 | EnsemblPlantsGene:SORBI_3003G438400 | EntrezGene:8074116 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR019734 | InterPro:TPR_repeat | ncoils:Coil | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF469 | ProteinID:OQU88236 |
| ProteinID:OQU88236.1 | SEG:seg | SMART:SM00028 | UniParc:UPI0009DC91A9 | UniProt:A0A1W0W1I2 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr3:+:73835995..73843790
Molecular Weight (calculated)
116183.0 Da
IEP (calculated)
5.356
GRAVY (calculated)
-0.764
Length
1057 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQYSVSLYCT YKFVKIGSMG AKNLVELCAE DLTKKPFHSV STATTKATTK PEDEILSEIL GGDGVQIQVS SKESLNSEFS GIRAISASSS GSSSRRTTAN
0101: LNMDTDGDEK LSAEAHDFDI NNAAAGFTPE ELRQQAVEEK KRYKTLKSEG KPDEALRVFK HGKELERQAA ALELELRKSR RMATKAPNVA AALSTPTTDS
0201: FDEPETKRYL AGKRVKKEKN DLASELRDLG WSDADLRDET KAAPMSVEGE LSQLLREVAP KSSEGKKTGG INKSQVNALK RQALLLKREG RLAEAKEELK
0301: KAKILEKQLE EQEILGETED SDDDLAAIIQ NMDDDKHDGI WMDDPNIPAF NFEQILGASN DLAIDGHFDV TDDDMNDPDM AAALKSFGWS EEDDKQLEHH
0401: EPVSSSNQDV LKEQMLALKK EAVANRRSGN VAEAMTLLKK AKLLEKDMET EEPESKVASP EGQKTMLAED ITFAGTTARP VLAHRSKLAI QRELLALKKK
0501: ALALRREGKV DESEEELKKG SVLEKQLEEF ENASKPVAKE TRSFASNPPY KVEPPSLNLA DDGYESEVTD NDMQDPALLS MLKNMGWEDV DTDSAKRNDK
0601: PLVSSHLVIQ KSSKAKVQLQ KELLGIKRKA LALRREGKNI EAEEELDKAK VLEQQLAAIE ESNSSTASQG VTNAGHQIIE NKLDVQHVST IDATVPTSSV
0701: TKTMKWDDML QAHGSEPGIS VDTLGDSPSK LQVETTGSKQ IHVAKESSDG ASSALSRPSY TNSLGSEKGS HSPSELRVRK EPHKTHGDDI LTDEILFHKR
0801: KAVAFKREGK MAEAREELKL ARLLEKRLEG AQQDNMDGDD NFIAPAGGQS IVAQQRASSS IQTDGVASAP PAQASKSTQP QKVMSSRDRL KIQRESLAHK
0901: RNALKLRREG KIAEADAAFE LAKALESQLE ESDNQGSSSG VKSGEPNDAM VEDLLDPQIM SALKSIGWSD MDLSMQSSST QPPKPPQTSK GQPTQKVEVK
1001: PAITVASKPQ NERSQLEEQI KVEKQKALNL KRERKQTEAL EALRSAKRLE KKLSSLS
0101: LNMDTDGDEK LSAEAHDFDI NNAAAGFTPE ELRQQAVEEK KRYKTLKSEG KPDEALRVFK HGKELERQAA ALELELRKSR RMATKAPNVA AALSTPTTDS
0201: FDEPETKRYL AGKRVKKEKN DLASELRDLG WSDADLRDET KAAPMSVEGE LSQLLREVAP KSSEGKKTGG INKSQVNALK RQALLLKREG RLAEAKEELK
0301: KAKILEKQLE EQEILGETED SDDDLAAIIQ NMDDDKHDGI WMDDPNIPAF NFEQILGASN DLAIDGHFDV TDDDMNDPDM AAALKSFGWS EEDDKQLEHH
0401: EPVSSSNQDV LKEQMLALKK EAVANRRSGN VAEAMTLLKK AKLLEKDMET EEPESKVASP EGQKTMLAED ITFAGTTARP VLAHRSKLAI QRELLALKKK
0501: ALALRREGKV DESEEELKKG SVLEKQLEEF ENASKPVAKE TRSFASNPPY KVEPPSLNLA DDGYESEVTD NDMQDPALLS MLKNMGWEDV DTDSAKRNDK
0601: PLVSSHLVIQ KSSKAKVQLQ KELLGIKRKA LALRREGKNI EAEEELDKAK VLEQQLAAIE ESNSSTASQG VTNAGHQIIE NKLDVQHVST IDATVPTSSV
0701: TKTMKWDDML QAHGSEPGIS VDTLGDSPSK LQVETTGSKQ IHVAKESSDG ASSALSRPSY TNSLGSEKGS HSPSELRVRK EPHKTHGDDI LTDEILFHKR
0801: KAVAFKREGK MAEAREELKL ARLLEKRLEG AQQDNMDGDD NFIAPAGGQS IVAQQRASSS IQTDGVASAP PAQASKSTQP QKVMSSRDRL KIQRESLAHK
0901: RNALKLRREG KIAEADAAFE LAKALESQLE ESDNQGSSSG VKSGEPNDAM VEDLLDPQIM SALKSIGWSD MDLSMQSSST QPPKPPQTSK GQPTQKVEVK
1001: PAITVASKPQ NERSQLEEQI KVEKQKALNL KRERKQTEAL EALRSAKRLE KKLSSLS
0001: MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
Arabidopsis Description
At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.