Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055915 | Potato | cytosol | 92.54 | 86.7 |
| CDY52319 | Canola | plastid | 46.37 | 45.08 |
| CDY25311 | Canola | cytosol, plastid | 47.5 | 45.01 |
| GSMUA_Achr7P20370_001 | Banana | nucleus | 42.9 | 40.19 |
| TraesCS5D01G485400.1 | Wheat | cytosol, plastid | 44.64 | 40.05 |
| TraesCS5B01G485600.1 | Wheat | cytosol, plastid | 44.43 | 39.98 |
| GSMUA_Achr5P22350_001 | Banana | cytosol | 43.41 | 39.57 |
| TraesCS5A01G472700.3 | Wheat | cytosol | 44.74 | 39.49 |
| Zm00001d017029_P001 | Maize | cytosol | 42.49 | 38.95 |
| Bra031406.1-P | Field mustard | nucleus | 35.96 | 38.55 |
| EES05335 | Sorghum | plastid | 42.9 | 38.08 |
| Os03t0669800-01 | Rice | plasma membrane | 35.65 | 37.45 |
| VIT_00s0361g00100.t01 | Wine grape | cytosol | 42.8 | 37.41 |
| AT1G61690.1 | Thale cress | cytosol | 44.43 | 37.15 |
| KRH49913 | Soybean | cytosol | 46.68 | 36.47 |
| KRH41976 | Soybean | cytosol | 46.58 | 36.33 |
| OQU88236 | Sorghum | nucleus | 38.41 | 35.57 |
| Solyc02g062000.2.1 | Tomato | cytosol | 5.62 | 11.8 |
| Solyc04g081750.2.1 | Tomato | cytosol | 6.03 | 10.48 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0009506 | GO:GO:0046872 | InterPro:IPR011990 | InterPro:IPR013083 | InterPro:IPR017455 |
| InterPro:IPR019734 | UniProt:K4B9K6 | PFAM:PF01363 | PFscan:PS50178 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF469 |
| SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF57903 | EnsemblPlantsGene:Solyc02g079850.2 | EnsemblPlants:Solyc02g079850.2.1 | InterPro:TPR-like_helical_dom_sf |
| InterPro:TPR_repeat | UniParc:UPI0002768C18 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:44256580..44260075
Molecular Weight (calculated)
109304.0 Da
IEP (calculated)
5.225
GRAVY (calculated)
-0.977
Length
979 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHCRRCGGI FCNSCTQQRM VLRGQGDSPV RICEPCKRLE EAARFELRYG QKSRASKGSS RFASKSEDEV LNHLLGKERT SDVLSHDQQS ASTASGSNVL
101: DFSGKDEAGD GSSNQTEQQA EMGSTTPEEL RQQAMEEKQN HRTLKAAGKP EEALRAFKRG KELERQAAAL EISLRKNRKR ALSSSNVTEI QQDNDAGKAS
201: GRKNKLSPQI TKEKDDLASE LRDLGWSDMD LRTADKRPAT MSLEGELSAL LGEVSGKTNP EKKIHGMDKS LVIAHKKKAL QLKREGKLAE AKEELKKAKI
301: LEKQIEEQEL LGDDEDSDDE LSSLIRGLDS DKFDDLSTRY KPDSSYDFDN LLGTADDIGT DGNFEVTDDD MYDPEIAAAL ESMGWTEDAA ESEVSEKQFK
401: PVDREVLLSE IQSLKREAVS QKRAGKTKEA MELLKRAKTL ESELEEQLSN GEEDVRKFVE RKDKEHKVAP KSKSVIQREL LGIKKKALAL RREGRLDEAE
501: EELERGKILE KQLEDIDNPP KFAQPIAGNK RNESITDIDA GDEDAEVTDQ DMHDPTYLSL LNNLGWQDDE KANIPSVSFQ GKNNFSNLSE SLTKEATNNI
601: QARASKKSKG EIQRELLGLK RKALTLRRQG ETEEAEELMN AAKMLEEQLA EIEESMSNPT KSNEQKARIA IDSPLENPQF PASDLWKSSI EDMENKVTRT
701: PEKPEEVSQS DEKPCISESK TAEEVNSQLD QNSLRQDILA RKRKAVALKR EGKVAEAKEE LRQAKLLEKH LEEEKTLGSS SSTVSVGPNT SHVGQNEASP
801: NKVPDISQVG QKEVSPSSGP KPLSGRDRFK LQQQSLSHKR QALKLRREGR TEEADAEFEL AKAIESQLEE LFSALKAIGI ADTSVVPRVP ERQETRKPTS
901: GDTDKTGTIA SQILERSEPK LPEARVSDES SNERKQLEER VKAEKLKALN LKRSGKQAEA LDALRRAKMF EKKLNALAS
101: DFSGKDEAGD GSSNQTEQQA EMGSTTPEEL RQQAMEEKQN HRTLKAAGKP EEALRAFKRG KELERQAAAL EISLRKNRKR ALSSSNVTEI QQDNDAGKAS
201: GRKNKLSPQI TKEKDDLASE LRDLGWSDMD LRTADKRPAT MSLEGELSAL LGEVSGKTNP EKKIHGMDKS LVIAHKKKAL QLKREGKLAE AKEELKKAKI
301: LEKQIEEQEL LGDDEDSDDE LSSLIRGLDS DKFDDLSTRY KPDSSYDFDN LLGTADDIGT DGNFEVTDDD MYDPEIAAAL ESMGWTEDAA ESEVSEKQFK
401: PVDREVLLSE IQSLKREAVS QKRAGKTKEA MELLKRAKTL ESELEEQLSN GEEDVRKFVE RKDKEHKVAP KSKSVIQREL LGIKKKALAL RREGRLDEAE
501: EELERGKILE KQLEDIDNPP KFAQPIAGNK RNESITDIDA GDEDAEVTDQ DMHDPTYLSL LNNLGWQDDE KANIPSVSFQ GKNNFSNLSE SLTKEATNNI
601: QARASKKSKG EIQRELLGLK RKALTLRRQG ETEEAEELMN AAKMLEEQLA EIEESMSNPT KSNEQKARIA IDSPLENPQF PASDLWKSSI EDMENKVTRT
701: PEKPEEVSQS DEKPCISESK TAEEVNSQLD QNSLRQDILA RKRKAVALKR EGKVAEAKEE LRQAKLLEKH LEEEKTLGSS SSTVSVGPNT SHVGQNEASP
801: NKVPDISQVG QKEVSPSSGP KPLSGRDRFK LQQQSLSHKR QALKLRREGR TEEADAEFEL AKAIESQLEE LFSALKAIGI ADTSVVPRVP ERQETRKPTS
901: GDTDKTGTIA SQILERSEPK LPEARVSDES SNERKQLEER VKAEKLKALN LKRSGKQAEA LDALRRAKMF EKKLNALAS
0001: MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
Arabidopsis Description
At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.