Factsheet for Os03t0669800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031405.1-P	Field mustard	cytosol	7.83	64.04
TraesCS5D01G485400.1	Wheat	cytosol, plastid	70.49	60.22
TraesCS5B01G485600.1	Wheat	cytosol, plastid	69.85	59.83
TraesCS5A01G472700.3	Wheat	cytosol	68.88	57.89
Zm00001d017029_P001	Maize	cytosol	63.09	55.06
EES05335	Sorghum	plastid	64.7	54.67
OQU88236	Sorghum	nucleus	54.83	48.34
GSMUA_Achr5P22350_001	Banana	cytosol	46.14	40.04
CDY25311	Canola	cytosol, plastid	42.17	38.04
CDY52319	Canola	plastid	40.88	37.84
PGSC0003DMT400055915	Potato	cytosol	40.45	36.08
Solyc02g079850.2.1	Tomato	cytosol	37.45	35.65
GSMUA_Achr7P20370_001	Banana	nucleus	38.3	34.16
VIT_00s0361g00100.t01	Wine grape	cytosol	38.84	32.32
AT1G61690.1	Thale cress	cytosol	40.34	32.11
KRH41976	Soybean	cytosol	40.02	29.72
KRH49913	Soybean	cytosol	38.73	28.81
Bra031406.1-P	Field mustard	nucleus	27.04	27.6
Os06t0724100-01	Rice	cytosol	5.58	10.66
Os07t0573300-01	Rice	cytosol	5.15	9.28

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.2	UniProt:A0A0P0W185	ProteinID:BAS85676.1	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0009506	GO:GO:0046872	InterPro:IPR011990
InterPro:IPR013083	InterPro:IPR017455	InterPro:IPR019734	EnsemblPlantsGene:Os03g0669800	EnsemblPlants:Os03t0669800-01	PFAM:PF01363
PFscan:PS50178	PANTHER:PTHR22835	PANTHER:PTHR22835:SF469	SMART:SM00028	SMART:SM00064	SUPFAM:SSF48452
SUPFAM:SSF57903	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0000E12192	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel
InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

Zinc finger, FYVE-type domain containing protein. (Os03t0669800-01)

Coordinates

chr3:+:26433380..26438222

Molecular Weight (calculated)

102617.0 Da

IEP (calculated)

5.603

GRAVY (calculated)

-0.778

Length

932 amino acids

Sequence
(BLAST)

001: TSSTSTSQGG RVLFVLVNML EKIGLPPKPS MRGASWVVDA THCQGCSVQF SLFTRKHHCQ RCGGLFCSNC TQQRMVLRGQ GDSPVRICDP CKKLEEAARY
101: ELRYGHKNRA SKANAKAASN PEDDVLSEIL GGDGMQTKFS RRESLDPELP GASSSSSSSR RTSGAFSMDG NGGESLSIEA QNYELNNTGS IFTPEELRQQ
201: AVEEKKKYKT LKSEGKPEEA LRAFKHGKEL ERQAAALGLE LRKNRRMATK APSVSAVVST KNLEGSDEAE SKKSLPGKRV RKEKNDLASE LKDLGWSDAD
301: LHDETRTTAM SVEGELSQIL REVTPKSSEG NKTSSIDKSQ VNALKRQALL LKREGKLAEA KEELKKAKIL ERQLEEQEIL GEADESDDDL AALIRNMDDG
401: NQDDILLDNP RFPDFNFEKL LGTSDDLLID GNFDITDDDM NDPDMTAALK SFGWSEEDEI QMEGHGPVSS LNQEALKEQV LALKREAIAQ KKAGNVAEAM
501: SLLRKAKLLE KDLETEQSES KVPSPQGHRS TRTEDITVAE MNTRPVSAPK SKLAIQRELL ALKKKALALR REGKVDEAEE ELKKGSVLEK QLEDLENSSA
601: RPVVKENRNF GSTPPYKVEP PTLDLADEGY EPEVTDNDMQ DPALLSVLKN MGWEDEDADT ASIINMPSNS SRIVSQKPTK SKGQIQKELL AIKRKALAFR
701: REGKNTEAEE ELEKAKVLEQ QLSEMEESVN LTASQQSARS AGQIRGNKSG ALLDPASSPD TSAHLPKLRN ATEGVISLPV HAAELAASLD AQASSQSIPP
801: TELIIPKPDH ASKVHSEGTR STLSRPSFTD PLVTAERLHS PSDVHDHKEP QIPHGHDTLK DEILHHKRKA VAFKREGKMA EAREELKQAK LLEKRLEVSQ
901: ENSANGRDES MKPVVQETNL IQQSASAKSC TD

Best Arabidopsis Sequence Match ( AT1G61690.1 )
(BLAST)

0001: MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S

Arabidopsis Description

At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.