Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G485400.1 | Wheat | cytosol, plastid | 94.32 | 95.88 |
| TraesCS5B01G485600.1 | Wheat | cytosol, plastid | 93.6 | 95.4 |
| Os03t0669800-01 | Rice | plasma membrane | 57.89 | 68.88 |
| Zm00001d017029_P001 | Maize | cytosol | 64.74 | 67.23 |
| EES05335 | Sorghum | plastid | 65.64 | 66.0 |
| Bra031405.1-P | Field mustard | cytosol | 6.31 | 61.4 |
| OQU88236 | Sorghum | nucleus | 57.62 | 60.45 |
| GSMUA_Achr5P22350_001 | Banana | cytosol | 46.71 | 48.23 |
| CDY52319 | Canola | plastid | 41.75 | 45.98 |
| CDY25311 | Canola | cytosol, plastid | 42.29 | 45.4 |
| PGSC0003DMT400055915 | Potato | cytosol | 42.65 | 45.26 |
| Solyc02g079850.2.1 | Tomato | cytosol | 39.49 | 44.74 |
| GSMUA_Achr7P20370_001 | Banana | nucleus | 39.4 | 41.82 |
| AT1G61690.1 | Thale cress | cytosol | 40.58 | 38.43 |
| Bra031406.1-P | Field mustard | nucleus | 30.66 | 37.24 |
| KRH41976 | Soybean | cytosol | 40.76 | 36.02 |
| KRH49913 | Soybean | cytosol | 40.13 | 35.51 |
| VIT_00s0361g00100.t01 | Wine grape | cytosol | 34.63 | 34.29 |
| TraesCS2A01G184400.2 | Wheat | cytosol | 5.5 | 12.15 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0009506 | GO:GO:0046872 | InterPro:IPR011990 | InterPro:IPR013083 | InterPro:IPR017455 |
| InterPro:IPR019734 | PFAM:PF01363 | PFscan:PS50178 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF469 | SMART:SM00028 |
| SMART:SM00064 | SUPFAM:SSF48452 | SUPFAM:SSF57903 | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | EnsemblPlantsGene:TraesCS5A01G472700 |
| EnsemblPlants:TraesCS5A01G472700.3 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | TIGR:cd00065 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:649431672..649436635
Molecular Weight (calculated)
121959.0 Da
IEP (calculated)
5.463
GRAVY (calculated)
-0.772
Length
1109 amino acids
Sequence
(BLAST)
(BLAST)
0001: MWVLVIKFNL QSALLADRQG FFLPVAMLEK IGLPPKPSMR GATWVLDASN CQGCAAQFSL FTRKHHCQRC GGLFCSSCTQ QRMVLRGQGD SPVQICDPCK
0101: KLEEAARYEL RYGHKNRAGK ANTKTASKPE DEILSELLGG DSVHGQLSRR ESLGSEVPGR TVSTASASSS GSRKASMDGN GDGSLSTEAQ NYELNNNASI
0201: FTPEELRQQA VEEKGKYKIL KSEGKPEEAL RAFKHGKELE RQAAALELEL RKSRRMATKA PNVSAVVGSQ KIEDYDDAVT KKAPSGKRVR KEKNDLASEL
0301: KDLGWSDADL HDETRPTTMS VEGELSQILR EVAPKTSEGK KAGGIDKSQV NALKRQALVL KREGKLAEAK EELKKAKILE RQLEEQEILG EAEESDDDLA
0401: AIIHNMDDDN QDDILYDNSR LPAINFEQIL AVSDDLNFDG NFDVTDDDIN DPAMAAALKS FGWSEDDDNQ MDSHAPVSSL NREAVKEQVL ALKREAVSHK
0501: KAGNVAEAMS LLKKAKLLEK DLETEQPESE VPFSGQKITH TEDITVTEIN TRRVSAPKSK LAIQRELLAL KKKALALRRE GKVDEAEEEL KKGNILEKQL
0601: EELESSSNRP VARENMGFSS KSPLNAEPPS LDFADEGYEP EVTDNDMQDP ALLSVLKNMG WEDDDNDSVK TTDKPSNRSP VVAQKPKKNK GQIQKELLAI
0701: KRKALAFRRE GKNTEAEEEL EKAKVLEEQL AEIEELANST ASQKGSGPGE HETMENKYDI QHVPNVHATA SSIRHALKED VSLPVNAAEF SSGSKPQSET
0801: VTSKPAHKLE VTSDGAYSAF SRSPIADQLQ TAEASHSPSD VDHKEPPKAH GDDTLRDDIL LHKRKAVAFK REGKLAEARE ELKLAKLLEK RLEAPQQDSE
0901: DGAHELATAA VQQSNSIQQS ASVTTHTNPL TYAPPAQENK SVEPQKAMSS RDRLRIQRES LTHKRNALKL RREGKTAEAD AEFELAKSLE SQLEESDSQG
1001: SNSGGKSEAS DAFVEDLIDP QMMSALKSIG WSAADLSTQS PSPQPLVKAE ARPTVAATSK AQTEKSQLEE QIKAEKLKAL TLKREGKQAE ALEALRSAKR
1101: LEKKLVSLS
0101: KLEEAARYEL RYGHKNRAGK ANTKTASKPE DEILSELLGG DSVHGQLSRR ESLGSEVPGR TVSTASASSS GSRKASMDGN GDGSLSTEAQ NYELNNNASI
0201: FTPEELRQQA VEEKGKYKIL KSEGKPEEAL RAFKHGKELE RQAAALELEL RKSRRMATKA PNVSAVVGSQ KIEDYDDAVT KKAPSGKRVR KEKNDLASEL
0301: KDLGWSDADL HDETRPTTMS VEGELSQILR EVAPKTSEGK KAGGIDKSQV NALKRQALVL KREGKLAEAK EELKKAKILE RQLEEQEILG EAEESDDDLA
0401: AIIHNMDDDN QDDILYDNSR LPAINFEQIL AVSDDLNFDG NFDVTDDDIN DPAMAAALKS FGWSEDDDNQ MDSHAPVSSL NREAVKEQVL ALKREAVSHK
0501: KAGNVAEAMS LLKKAKLLEK DLETEQPESE VPFSGQKITH TEDITVTEIN TRRVSAPKSK LAIQRELLAL KKKALALRRE GKVDEAEEEL KKGNILEKQL
0601: EELESSSNRP VARENMGFSS KSPLNAEPPS LDFADEGYEP EVTDNDMQDP ALLSVLKNMG WEDDDNDSVK TTDKPSNRSP VVAQKPKKNK GQIQKELLAI
0701: KRKALAFRRE GKNTEAEEEL EKAKVLEEQL AEIEELANST ASQKGSGPGE HETMENKYDI QHVPNVHATA SSIRHALKED VSLPVNAAEF SSGSKPQSET
0801: VTSKPAHKLE VTSDGAYSAF SRSPIADQLQ TAEASHSPSD VDHKEPPKAH GDDTLRDDIL LHKRKAVAFK REGKLAEARE ELKLAKLLEK RLEAPQQDSE
0901: DGAHELATAA VQQSNSIQQS ASVTTHTNPL TYAPPAQENK SVEPQKAMSS RDRLRIQRES LTHKRNALKL RREGKTAEAD AEFELAKSLE SQLEESDSQG
1001: SNSGGKSEAS DAFVEDLIDP QMMSALKSIG WSAADLSTQS PSPQPLVKAE ARPTVAATSK AQTEKSQLEE QIKAEKLKAL TLKREGKQAE ALEALRSAKR
1101: LEKKLVSLS
0001: MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
Arabidopsis Description
At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.