Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P22350_001 | Banana | cytosol | 58.66 | 57.08 |
| Solyc02g079850.2.1 | Tomato | cytosol | 40.19 | 42.9 |
| PGSC0003DMT400055915 | Potato | cytosol | 41.24 | 41.24 |
| CDY52319 | Canola | plastid | 38.56 | 40.02 |
| TraesCS5D01G485400.1 | Wheat | cytosol, plastid | 41.63 | 39.87 |
| TraesCS5B01G485600.1 | Wheat | cytosol, plastid | 41.44 | 39.8 |
| TraesCS5A01G472700.3 | Wheat | cytosol | 41.82 | 39.4 |
| Zm00001d017029_P001 | Maize | cytosol | 39.62 | 38.76 |
| CDY25311 | Canola | cytosol, plastid | 38.28 | 38.72 |
| EES05335 | Sorghum | plastid | 40.57 | 38.44 |
| OQU88236 | Sorghum | nucleus | 38.76 | 38.32 |
| Os03t0669800-01 | Rice | plasma membrane | 34.16 | 38.3 |
| Bra031406.1-P | Field mustard | nucleus | 29.95 | 34.28 |
| KRH49913 | Soybean | cytosol | 41.05 | 34.24 |
| VIT_00s0361g00100.t01 | Wine grape | cytosol | 36.65 | 34.2 |
| KRH41976 | Soybean | cytosol | 40.96 | 34.1 |
| AT1G61690.1 | Thale cress | cytosol | 37.61 | 33.56 |
| Bra031405.1-P | Field mustard | cytosol | 2.39 | 21.93 |
| GSMUA_Achr1P27590_001 | Banana | cytosol, nucleus, plastid | 2.2 | 14.84 |
| GSMUA_Achr1P27620_001 | Banana | cytosol | 1.82 | 14.29 |
| GSMUA_Achr1P27690_001 | Banana | mitochondrion | 2.58 | 13.43 |
| GSMUA_Achr7P20360_001 | Banana | extracellular | 1.24 | 12.5 |
| GSMUA_Achr1P27610_001 | Banana | cytosol | 0.77 | 11.27 |
| GSMUA_Achr8P33940_001 | Banana | cytosol | 5.45 | 10.94 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 0.86 | 10.11 |
| GSMUA_Achr1P26420_001 | Banana | cytosol | 4.5 | 9.29 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P20370_001 | EnsemblPlants:GSMUA_Achr7T20370_001 | EnsemblPlantsGene:GSMUA_Achr7G20370_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:IPR019734 | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | ncoils:Coil | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF469 | SEG:seg | SMART:SM00028 | SUPFAM:SSF48452 | UniParc:UPI000295DD3E | UniProt:M0TJ74 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G20370_001]
Coordinates
chr7:+:23461067..23467680
Molecular Weight (calculated)
116579.0 Da
IEP (calculated)
5.324
GRAVY (calculated)
-0.759
Length
1045 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVLRGQGDAP VRICEPCKRI EEAARFEFRY GHRKQTAKVN AKQALQAFKH EEEVLSQILG TDGKHTSLSE QNSNNLVNLD LKLVPSSASC SSSRREGDNI
0101: RSVSVDTHNN LKVDLMLGDP EELRQQAVEE KRKYKTLKAE GKSEEALQAF KRGKELERQA GALEITLRKN RRMAAKASNF STVASIQKIE GHEEFGGNQK
0201: LSSQRGTEVK DDLAAELREL GWSDADLHDA DKRPAKLSLE GELSNLLALV SQKSSQGIKK GGVDKSEVIT LKKRALFLKR EGKLSEAKEE LKRAKLLEKQ
0301: IEEQELLGEA EESDDELRSL INSLDEDKQD NLALDHASDA GFQFDNQLVF SDDLPIDGNF EVTDGDMNDP DLVAALKSFG WSDEDEEQPA SQSNEYAPFD
0401: REALRRQVLS LKREALSQKR DGNISEAMEL LKKSKLLEKD LVGMQCSSEI VASEFKKKSS SPQSPPKSKL MIQKELLALK KRVLTFRRQG RIEDAEEELK
0501: KGKILEQQLE EMERAPRNHG EDLRKEKNLD ITHVHEGGDT RSLNLGEERY ETEVTEQDMH DPAFLSLLKN MGWNEDDDVE SVGMTNRASK QMNDPSTHYN
0601: ALPLAPMKAK RSKADIQKEL LAIKRKALAL RRQGRTEEAE EELEKAKALE TQMTEMEVSS NVSSVEVDSL AFETLIPQNL SVKEHASGDA RNTAGSLASF
0701: ALNKTPKDAA VPLHVPVGNS TLHQSNQSLN LECLSGSEAE ALHSSMRGSV KREGTDANFF SITSAPVMLA VESTLKEKTS SKTQEQKVAL VADAFRDEIL
0801: ARKRKAVALK REGKLAEARE ELRQAKLLEK SLEDGQQADV VTRGSLTPDS TALKQENIPS PSEKPKSGRD RFRIQQESLS HKRNALKLRR EGKIDESEAE
0901: LELAKALEKQ LEDFDQGSST NMTGNKSEAM DDVVVEDLLD PQLLSALKAI GLEDSVITSQ PYHETDAQPN FDRSGNQRME KADLEEQIKA EKHRALNFKR
1001: AGKQAEALEA LRSAKRCLSL PEACHLAGTY LSLLECNQVD VSLFF
0101: RSVSVDTHNN LKVDLMLGDP EELRQQAVEE KRKYKTLKAE GKSEEALQAF KRGKELERQA GALEITLRKN RRMAAKASNF STVASIQKIE GHEEFGGNQK
0201: LSSQRGTEVK DDLAAELREL GWSDADLHDA DKRPAKLSLE GELSNLLALV SQKSSQGIKK GGVDKSEVIT LKKRALFLKR EGKLSEAKEE LKRAKLLEKQ
0301: IEEQELLGEA EESDDELRSL INSLDEDKQD NLALDHASDA GFQFDNQLVF SDDLPIDGNF EVTDGDMNDP DLVAALKSFG WSDEDEEQPA SQSNEYAPFD
0401: REALRRQVLS LKREALSQKR DGNISEAMEL LKKSKLLEKD LVGMQCSSEI VASEFKKKSS SPQSPPKSKL MIQKELLALK KRVLTFRRQG RIEDAEEELK
0501: KGKILEQQLE EMERAPRNHG EDLRKEKNLD ITHVHEGGDT RSLNLGEERY ETEVTEQDMH DPAFLSLLKN MGWNEDDDVE SVGMTNRASK QMNDPSTHYN
0601: ALPLAPMKAK RSKADIQKEL LAIKRKALAL RRQGRTEEAE EELEKAKALE TQMTEMEVSS NVSSVEVDSL AFETLIPQNL SVKEHASGDA RNTAGSLASF
0701: ALNKTPKDAA VPLHVPVGNS TLHQSNQSLN LECLSGSEAE ALHSSMRGSV KREGTDANFF SITSAPVMLA VESTLKEKTS SKTQEQKVAL VADAFRDEIL
0801: ARKRKAVALK REGKLAEARE ELRQAKLLEK SLEDGQQADV VTRGSLTPDS TALKQENIPS PSEKPKSGRD RFRIQQESLS HKRNALKLRR EGKIDESEAE
0901: LELAKALEKQ LEDFDQGSST NMTGNKSEAM DDVVVEDLLD PQLLSALKAI GLEDSVITSQ PYHETDAQPN FDRSGNQRME KADLEEQIKA EKHRALNFKR
1001: AGKQAEALEA LRSAKRCLSL PEACHLAGTY LSLLECNQVD VSLFF
0001: MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
Arabidopsis Description
At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.