CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017029_P001	Maize	cytosol	84.95	87.73
OQU88236	Sorghum	nucleus	67.36	70.29
TraesCS5B01G485600.1	Wheat	cytosol, plastid	66.09	67.0
TraesCS5D01G485400.1	Wheat	cytosol, plastid	66.09	66.82
Bra031405.1-P	Field mustard	cytosol	6.8	65.79
TraesCS5A01G472700.3	Wheat	cytosol	66.0	65.64
Os03t0669800-01	Rice	plasma membrane	54.67	64.7
GSMUA_Achr5P22350_001	Banana	cytosol	45.42	46.65
CDY25311	Canola	cytosol, plastid	42.79	45.69
CDY52319	Canola	plastid	41.43	45.38
PGSC0003DMT400055915	Potato	cytosol	41.89	44.21
Solyc02g079850.2.1	Tomato	cytosol	38.08	42.9
GSMUA_Achr7P20370_001	Banana	nucleus	38.44	40.57
AT1G61690.1	Thale cress	cytosol	40.53	38.17
Bra031406.1-P	Field mustard	nucleus	30.46	36.8
KRH41976	Soybean	cytosol	41.16	36.18
KRH49913	Soybean	cytosol	40.53	35.67
VIT_00s0361g00100.t01	Wine grape	cytosol	34.0	33.48
OQU77119	Sorghum	cytosol	5.62	12.33
EER97421	Sorghum	cytosol	5.89	12.17

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.2	EntrezGene:8070573	UniProt:C5XWD5	ncoils:Coil	EnsemblPlants:EES05335
ProteinID:EES05335	ProteinID:EES05335.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046872
InterPro:IPR011990	InterPro:IPR013083	InterPro:IPR017455	InterPro:IPR019734	PFAM:PF01363	PFscan:PS50178
PANTHER:PTHR22835	PANTHER:PTHR22835:SF469	SMART:SM00028	SMART:SM00064	EnsemblPlantsGene:SORBI_3004G196700	SUPFAM:SSF48452
SUPFAM:SSF57903	unigene:Sbi.19742	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0001A851D7	RefSeq:XP_002452359.1
InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:54784756..54793294

Molecular Weight (calculated)

120929.0 Da

IEP (calculated)

5.751

GRAVY (calculated)

-0.839

Length

1103 amino acids

Sequence
(BLAST)

0001: MLEKIGLPPK PSMRGATWVV DASHCQGCSV QFSLFTRKHH CQRCGGLFCS SCTQQRMVLR GQGDSPVRIC DPCKKLEEAA RHELRYGHKN RATRATKSGS
0101: KPEDDILSEI LGGGEHIQSL DSELPGRTTS NASTSRRTSS NFSADSNGDE SLSAEAHNYE LNNTASIFTP EELRQQAVEE KKRYKTLKSE GKPEEALRAF
0201: KHGKELERQA AALELELRRS RRMATKAPNV SAAVGTSTTA GSDEAETKRS STGKRIKKEK NDLASELRDL GWSDADLRDE TKAAPMSLEG ELSQLLREVA
0301: PKPLEGKRTG GVDKSQVNAL KRQALLLKRE GRLAEAKEEL KKAKILEKQL EEQEILGEAE DSDDDLAAII RNMDGDKNDD IFVDDPKFPA FNFEQILGAS
0401: NDLATDGHFD VTDDDMNDPD MAAALKSFGW SEEDDKQLEN HEPVSSNQEV LKEQVLALKR EAVANRRSGN VAEAMLLLKK AKLLEKDLEI EEPVSKVPSP
0501: EGQKTTNVED ATFAGMNARS ISAPKSKLAI QRELLALKKK ALALRREGKV DESEEELKKG SVLGKQLEEL ENSSKPPVPK ETRSLPSNPP YKVEPPNISL
0601: ADEVYEPEVT DNDMQDPALL SVLKNMGWED AGSDSVETTD KPSISSHVVP HKSSKTKGQL QKELLGIKRK ALALRREGKT TEAEDELEKA KVLEQQLAEI
0701: EESNNLSASQ GVTTAGHQIT ENKYDVQHVP GVDATVHPSS VRNAMKGDEI LPVHASESGT SEVTLSGSSI KPGSSIKPQT DTTNSKQGDV GEESRAGRSL
0801: ALSQPAFTDP LGSEKGSHSP SLVHDHYEHQ KTQGDDTLKD DILLHKRKAV AFKREGKMAE AREELKLAKL LEKRLQGAQQ DSMDGVGDSI TPAVEQNIVV
0901: QQPASSSNHT DDVTSAPPAQ VSKSTQPQKA MSSRDRLKIQ RESLAHKRNA LKLRREGKTA EADAEFELAK ELESQLEEPD NQSSSSGGKS SEPNDAIVEN
1001: LLDPQIMSAL RSIGWSDMDL SMQSSSAQPQ KPMQPSTSQP PQKVEAKSSV TGTSKPQSER SQLEEQIKVE KLKALNLKRE GKQAEALEAL RSAKRLEKKL
1101: NST

Best Arabidopsis Sequence Match ( AT1G61690.1 )
(BLAST)

0001: MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S

Arabidopsis Description

At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.