Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G485400.1 | Wheat | cytosol, plastid | 97.89 | 97.62 |
| TraesCS5A01G472700.3 | Wheat | cytosol | 95.4 | 93.6 |
| Os03t0669800-01 | Rice | plasma membrane | 59.83 | 69.85 |
| Zm00001d017029_P001 | Maize | cytosol | 66.08 | 67.32 |
| EES05335 | Sorghum | plastid | 67.0 | 66.09 |
| Bra031405.1-P | Field mustard | cytosol | 6.53 | 62.28 |
| OQU88236 | Sorghum | nucleus | 58.82 | 60.55 |
| GSMUA_Achr5P22350_001 | Banana | cytosol | 47.33 | 47.95 |
| CDY52319 | Canola | plastid | 42.46 | 45.88 |
| CDY25311 | Canola | cytosol, plastid | 42.74 | 45.01 |
| PGSC0003DMT400055915 | Potato | cytosol | 43.11 | 44.88 |
| Solyc02g079850.2.1 | Tomato | cytosol | 39.98 | 44.43 |
| GSMUA_Achr7P20370_001 | Banana | nucleus | 39.8 | 41.44 |
| AT1G61690.1 | Thale cress | cytosol | 41.08 | 38.17 |
| Bra031406.1-P | Field mustard | nucleus | 30.88 | 36.8 |
| KRH41976 | Soybean | cytosol | 41.27 | 35.78 |
| KRH49913 | Soybean | cytosol | 40.62 | 35.28 |
| VIT_00s0361g00100.t01 | Wine grape | cytosol | 35.29 | 34.29 |
| TraesCS2B01G223000.1 | Wheat | cytosol | 5.61 | 12.15 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0009506 | GO:GO:0046872 | InterPro:IPR011990 | InterPro:IPR013083 | InterPro:IPR017455 |
| InterPro:IPR019734 | PFAM:PF01363 | PFscan:PS50178 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF469 | SMART:SM00028 |
| SMART:SM00064 | SUPFAM:SSF48452 | SUPFAM:SSF57903 | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | EnsemblPlantsGene:TraesCS5B01G485600 |
| EnsemblPlants:TraesCS5B01G485600.1 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | TIGR:cd00065 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:656904253..656909974
Molecular Weight (calculated)
119325.0 Da
IEP (calculated)
5.420
GRAVY (calculated)
-0.808
Length
1088 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLEKIGLPPK PSMRGATWVL DASNCQGCAA QFSLFTRKHH CQRCGGLFCS SCTQQRMVLR GQGDSPVRIC DPCKKLEEAA RYELRYGHKS RAGKANTKTA
0101: SKPEDEILSE LLGGDSVQGQ LSRRESLGSE VPGRTVSTAS ASSSGSRKAS MDGNGDGSLS TEAQNYELNN TASIFTPEEL RQQAVEEKGK YKILKSEGKP
0201: EEALRAFKHG KELERQAAAL ELELRKSRRM ATKAPNVSAV VGTQKIEDYD DAVTKKAPSG KRVRKEKNDL ASELKDLGWS DADLHDETRP TAMSVEGELS
0301: QILREVAPKT SEGKKAGGID KSQVNALKRQ ALVLKREGKL AEAKEELKKA KILERQLEEQ EILGEAEESD DDLAAIIHNM DDDNQDDILY DNSRLPAINF
0401: EQILAVSDDL NFDGNFDVTD DDINDPAMAA ALKSFGWSED DDNQMDSHAP VSSLNREAVK EQVLALKREA VSHKKAGNVA EAMSLLKKAK LLEKDLETEQ
0501: PESEVLSPGQ KITHTEDIRV TEINTRRVSA PKSKLAIQRE LLALKKKALA LRREGKVDEA EEELKKGSIL EKQLEELESS SSRPVARENM GFSSKSPLNA
0601: EPPSLDFTDE GYEPEVTDND MQDPALLSVL KNMGWEDDDN DSVKTTDKPS NRSPVVAQKP KKNKGQIQKE LLAIKRKALA FRREGKNTEA EEELEKAKVL
0701: EEQLAEIEEL ANSTASQKGS GPGEHETMEN KYDTQQVPNV HATASSIRHT LKEDVLLPVN AAELGASMDT VASSGSKPQT ETVISQPARK SSDGAYSAFS
0801: RSPIADQLQT AEASHSPSDV DHKEPPKPHG GDTVRDDILL HKRKAVAFKR EGKLAEAREE LKLAKLLEKR LEAPQQDSED GAHELATSAV QQSNSIQQSA
0901: SATTHTNPLT YAPPAQENKS VEPQKAMSSR DRLRIQRESL THKRNALKLR REGKTAEADA EFELAKSLES QLEESDSQGS NSGGKSEASD AFVEDLIDPQ
1001: MMSALKSIGW SAADLSTQSP SPQPLVKAEA RPTVAATSKA QTEKSQLEEQ IKAEKLKALT LKREGKQAEA LEALRSAKRL EKKLVSLS
0101: SKPEDEILSE LLGGDSVQGQ LSRRESLGSE VPGRTVSTAS ASSSGSRKAS MDGNGDGSLS TEAQNYELNN TASIFTPEEL RQQAVEEKGK YKILKSEGKP
0201: EEALRAFKHG KELERQAAAL ELELRKSRRM ATKAPNVSAV VGTQKIEDYD DAVTKKAPSG KRVRKEKNDL ASELKDLGWS DADLHDETRP TAMSVEGELS
0301: QILREVAPKT SEGKKAGGID KSQVNALKRQ ALVLKREGKL AEAKEELKKA KILERQLEEQ EILGEAEESD DDLAAIIHNM DDDNQDDILY DNSRLPAINF
0401: EQILAVSDDL NFDGNFDVTD DDINDPAMAA ALKSFGWSED DDNQMDSHAP VSSLNREAVK EQVLALKREA VSHKKAGNVA EAMSLLKKAK LLEKDLETEQ
0501: PESEVLSPGQ KITHTEDIRV TEINTRRVSA PKSKLAIQRE LLALKKKALA LRREGKVDEA EEELKKGSIL EKQLEELESS SSRPVARENM GFSSKSPLNA
0601: EPPSLDFTDE GYEPEVTDND MQDPALLSVL KNMGWEDDDN DSVKTTDKPS NRSPVVAQKP KKNKGQIQKE LLAIKRKALA FRREGKNTEA EEELEKAKVL
0701: EEQLAEIEEL ANSTASQKGS GPGEHETMEN KYDTQQVPNV HATASSIRHT LKEDVLLPVN AAELGASMDT VASSGSKPQT ETVISQPARK SSDGAYSAFS
0801: RSPIADQLQT AEASHSPSDV DHKEPPKPHG GDTVRDDILL HKRKAVAFKR EGKLAEAREE LKLAKLLEKR LEAPQQDSED GAHELATSAV QQSNSIQQSA
0901: SATTHTNPLT YAPPAQENKS VEPQKAMSSR DRLRIQRESL THKRNALKLR REGKTAEADA EFELAKSLES QLEESDSQGS NSGGKSEASD AFVEDLIDPQ
1001: MMSALKSIGW SAADLSTQSP SPQPLVKAEA RPTVAATSKA QTEKSQLEEQ IKAEKLKALT LKREGKQAEA LEALRSAKRL EKKLVSLS
0001: MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
0101: TVKNEDDVLS EILGSDVDVS SSSESVSSTD RNASKEMASS SSNKGMELDA SPEELRKQAV EAKNKYRILK GEGKSDEALK AFKRGRELER EADALEISLR
0201: RNRKRELSMR NVAETQNKAA TKESSKSQKP LRQGGKGNDD LAADLRELGW SDDEDKKPAT ISLEGEFSSL LREIPRSANP QKTGGIDKSQ VIALKRKALT
0301: LKREGKLAEA KDELKKAKIL ERELEEQELL GGADGSDDEL SALINSMDDD KEDDLLAQYE GSHDFDISNL VGNLDDIGVH GEYDVTDEDM EDPAIAAALK
0401: SLGWSEDPGH HENVHSRPSP KNRDESLAEI QTLKREALNL KRAGNVVEAM ATLKKAKLLE KELEAADTSS ETVDTTRAER DTSLKPPPRS RLAIQKELLA
0501: VKKKALTLRR EGKFNEAEEE LKKGAVLQNQ LDELDNSSKL AATGKATREK GNDLPDISSL DDDGEVDVKD EELNDPNYLS MLKSLGWNDE DNNPAGPSSE
0601: KSDPLNSRPG KTAEAQGAYE VRVTKPRRTK AEIQRELLGL KRKALTLRRQ GNVDEAEEVL NQTQILEAQI MEIDSGKNLY ADSDQPKKRS NDLATDSRLN
0701: GGDDSVTEND MKDPALLSTL KNLGWEDEEP KKEEASFGSV QSSGPRIAAK SKGQIQRELL DLKRKALAFK RQGKTGDADE LYSKASVLEA QLAELETPKM
0801: EMKGSASAIK PENYMDVDLL VGSQMEDKAI KSASVSHAPQ DSYDLLGDFI SPAKSGSSGV VSQPGQQQPS MMDLLTGEHS ERSQIHAEKG NAETMSGFRS
0901: GNNHGAEQRV AREESEPSHI QSASIQNTSP QNTLKQEILA HKKKALALKR EGNISEAKKA LQEAKLLERR LQEGENPSPE KLGRDDMVST TEDPPAREKE
1001: NSPSSSAPKA MSGRDRFKLQ QESLSHKRQA MKLRREGKMQ EAEAEFEIAK TLEAQLEDST SSKPEPVDDV AVEDFLDPQL LSALKAIGLD NPVNPPPVSK
1101: TDTTQAAAKP NPVKESNRNT NNQERSQLEE RIKAEKVKAV TFKRAGKQAE ALDALRRAKL YEKKLNALAS S
Arabidopsis Description
At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.