Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G203300.1 | Wheat | cytosol | 90.24 | 90.24 |
| HORVU2Hr1G037770.2 | Barley | cytosol | 85.06 | 85.06 |
| TraesCS2A01G184400.2 | Wheat | cytosol | 84.86 | 84.86 |
| Os07t0573300-01 | Rice | cytosol | 77.29 | 75.05 |
| EER97421 | Sorghum | cytosol | 75.9 | 71.35 |
| Zm00001d021878_P003 | Maize | cytosol | 70.32 | 65.13 |
| CDY29372 | Canola | cytosol | 25.5 | 63.37 |
| Bra025793.1-P | Field mustard | cytosol | 24.9 | 62.19 |
| GSMUA_Achr1P27620_001 | Banana | cytosol | 16.14 | 60.9 |
| GSMUA_Achr1P27590_001 | Banana | cytosol, nucleus, plastid | 18.33 | 59.35 |
| KRH05975 | Soybean | cytosol | 38.65 | 59.33 |
| GSMUA_Achr1P27690_001 | Banana | mitochondrion | 23.51 | 58.71 |
| CDY44204 | Canola | cytosol | 41.83 | 53.85 |
| GSMUA_Achr8P33940_001 | Banana | cytosol | 54.78 | 52.78 |
| KRH61022 | Soybean | nucleus | 51.39 | 49.14 |
| CDY54337 | Canola | cytosol | 54.18 | 48.83 |
| CDY62935 | Canola | cytosol | 53.59 | 48.64 |
| Bra016476.1-P | Field mustard | cytosol | 53.59 | 48.64 |
| KRH51684 | Soybean | cytosol | 51.2 | 46.9 |
| KRH17455 | Soybean | extracellular | 14.74 | 45.96 |
| AT1G20110.1 | Thale cress | cytosol | 54.38 | 45.42 |
| VIT_18s0001g14750.t01 | Wine grape | cytosol | 52.79 | 45.3 |
| Solyc04g081750.2.1 | Tomato | cytosol | 49.6 | 44.23 |
| PGSC0003DMT400025563 | Potato | cytosol | 49.4 | 44.05 |
| KRH45071 | Soybean | cytosol, nucleus, plastid | 6.37 | 42.11 |
| GSMUA_Achr1P26420_001 | Banana | cytosol | 41.83 | 41.5 |
| CDY43412 | Canola | nucleus | 35.06 | 32.12 |
| CDY37424 | Canola | extracellular | 17.33 | 30.63 |
| TraesCS5B01G485600.1 | Wheat | cytosol, plastid | 12.15 | 5.61 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G223000.1 | EnsemblPlantsGene:TraesCS2B01G223000 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 |
| InterPro:IPR013083 | InterPro:IPR017455 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD |
| PANTHER:PTHR22835 | PANTHER:PTHR22835:SF473 | PFAM:PF01363 | PFscan:PS50178 | SEG:seg | SMART:SM00064 |
| SUPFAM:SSF50729 | SUPFAM:SSF57903 | MapMan:22.5.4.3.7 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:212774059..212781335
Molecular Weight (calculated)
53445.9 Da
IEP (calculated)
6.192
GRAVY (calculated)
-0.608
Length
502 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHGSGDYAS SAPAGHYYPH QYAPPGPTPH PAAADPPIPG GYASAPPYSV GGYPEQPPSA PSYTQPPQYA GYPPYNPTPY PPEPTPAPYY SYSQPTQPTP
101: AAEPSPPPLP YDAPYYGGGY QQPAAGYGDD DYLNEGAYAY TGDAGPEPYG ARGTAPTRSG AAMFDDYGRS IGLSSGGAEQ PHGGGGGSVG GSFGKIARAV
201: PKAETHEDAS GGAQKFRVKL LPEGAGSPTD VLCQIGLDGI RMLDPSTSRT LRIYPLDTLT KWEVLDSTVF AIWAKTSVDF EAKRIRLKSN SYTSNTLLDT
301: VTAATVQFKE IGEDARAKGT VDAGKSSIQS NEKKKGFDWM FAKPVDEVKD HWVPDEAAKK CQSCAGDFSH FNRRHHCRNC GEIFCDKCSQ GRIALTAEDN
401: APLVRVCDRC MAEVSQRLSM AQEAANRSTT VQSHGDLARK LKEELERNRK SSGTASGGAS GTRMREVACP TCTVHLQVEV PISGSETVEC GVCQHAFLVS
501: AN
101: AAEPSPPPLP YDAPYYGGGY QQPAAGYGDD DYLNEGAYAY TGDAGPEPYG ARGTAPTRSG AAMFDDYGRS IGLSSGGAEQ PHGGGGGSVG GSFGKIARAV
201: PKAETHEDAS GGAQKFRVKL LPEGAGSPTD VLCQIGLDGI RMLDPSTSRT LRIYPLDTLT KWEVLDSTVF AIWAKTSVDF EAKRIRLKSN SYTSNTLLDT
301: VTAATVQFKE IGEDARAKGT VDAGKSSIQS NEKKKGFDWM FAKPVDEVKD HWVPDEAAKK CQSCAGDFSH FNRRHHCRNC GEIFCDKCSQ GRIALTAEDN
401: APLVRVCDRC MAEVSQRLSM AQEAANRSTT VQSHGDLARK LKEELERNRK SSGTASGGAS GTRMREVACP TCTVHLQVEV PISGSETVEC GVCQHAFLVS
501: AN
0001: MGTRDSNNRT FSEIVGLIKS WLPWRSEPAT VSRDFWMPDQ SCRVCYECDC QFTLINRRHH CRHCGRVFCG KCTANSIPFA PSDLRTPRED WERIRVCNYC
0101: FRQWEQGDGG PHVSNITELS TSPSETSLLS SKTSTTANSS SFALGSMPGL IGLNQRVHHG SDVSLHGVSS METSVTKQGK ETSRRSSFIA TDVEDPSRFA
0201: LNSIRSDDEY DEYGAYQTDI ETSHSPRANE YYGPMEYNGM GIDDVPCKHL GGETADQKSL SGSPLIHQCL ESLIREGSEQ FQKKSEHDGR DECEASSPAD
0301: ISDDQVVEPV DFENNGLLWV PPEPENEEDE RESALFDEED NEGDASGEWG YLRPSTSFGS GEYRGEDRTT EEHKKAMKNV VDGHFRALLA QLLQVENISV
0401: SDEEGKESWL EIITSLSWEA ANLLKPDMSK SGGMDPGGYV KVKCLASGFR HDSMVVKGVV CKKNVVNRRM STKIEKARLL ILGGGLEYQR VSNQLSSFDT
0501: LLQQEKDHLK MAVAKIHAER PNILLVEKSV SRFAQEYLLA KDISLVLNIK RPLLDRIARC TGAQIIPSVD HLSSQKLGYC ENFRVDRYPE EHGSTGQVGK
0601: KVVKTLMYFE HCPKPLGFTI LLRGANEDEL KKVKHVVQYG VFAAYHLALE TSFLADEGAS PELPLNSPIT VALPDKSTSI ERSISTVPGF TVSTYEKSPT
0701: MLSCAEPQRA NSVPVSELLS TTTNLSIQKD IPPIPYGSGW QAREINPSFV FSRHNISLNL PDRVIESRNS DLSGRSVPVD TPADKSNPIV VADETTNNSL
0801: HLSGQGFVRK SSQIGTSIMV ENQDNGSELT IAQQQNNEKP KETQSQKEEF PPSPSDHQSI LVSLSSRSVW KGTVCERSHL FRIKYYGSFD KPLGRFLRDH
0901: LFDQSYRCRS CEMPSEAHVH CYTHRQGSLT ISVKKLQDYL LPGEKEGKIW MWHRCLRCPR LNGFPPATLR VVMSDAAWGL SFGKFLELSF SNHAAASRVA
1001: CCGHSLHRDC LRFYGFGNMV ACFRYATIDV HSVYLPPSIL SFNYENQDWI QRETDEVIER AELLFSEVLN AISQIAEKGF RRRIGELEEV LQKEKAEFEE
1101: NMQKILHREV NEGQPLVDIL ELYRIHRQLL FQSYMWDHRL INASTLHKLE NSDDTKREEN EKPPLAKSQT LPEMNAGTNS LLTGSEVNLN PDGDSTGDTG
1201: SLNNVQKEAD TNSDLYQEKD DGGEVSPSKT LPDTSYPLEN KVDVRRTQSD GQIVMKNLSA TLDAAWIGER QTSVEIPTNN KVSLPPSTMS NSSTFPPISE
1301: GLMPIDLPEQ QNEFKVAYPV SPALPSKNYE NSEDSVSWLS VPFLNFYRSI NKNFLLSSQK LDTFGEHSPI YISSFREAEL QGGPRLLLPV GLNDIVVPVY
1401: DDEPTSMIAY ALMSPEYQRQ TSAEGESLVS YPSELNIPRP VDDTIFDPSR SNGSVDESIL SISSSRSTSL LDPLSYTKAL HARVSYGEDG TLGKVKYTVT
1501: CYYAKRFEAL RGICLPSELE YIRSLSRCKK WGAQGGKSNV FFAKTLDDRF IIKQVTKTEL ESFIKFAPAY FKYLSESIST KSPTCLAKIL GIYQVATKQL
1601: KSGKETKMDV LIMENLLFGR TVKRLYDLKG SSRARYNPDS SGSNKVLLDQ NLIEAMPTSP IFVGNKAKRL LERAVWNDTA FLALGDVMDY SLLVGVDEEK
1701: NELVLGIIDF LRQYTWDKHL ESWVKFTGIL GGPKNEAPTV ISPKQYKRRF RKAMTTYFLM VPDQWSPPNV VANNSKSDQP EETSQAGTQA E
0101: FRQWEQGDGG PHVSNITELS TSPSETSLLS SKTSTTANSS SFALGSMPGL IGLNQRVHHG SDVSLHGVSS METSVTKQGK ETSRRSSFIA TDVEDPSRFA
0201: LNSIRSDDEY DEYGAYQTDI ETSHSPRANE YYGPMEYNGM GIDDVPCKHL GGETADQKSL SGSPLIHQCL ESLIREGSEQ FQKKSEHDGR DECEASSPAD
0301: ISDDQVVEPV DFENNGLLWV PPEPENEEDE RESALFDEED NEGDASGEWG YLRPSTSFGS GEYRGEDRTT EEHKKAMKNV VDGHFRALLA QLLQVENISV
0401: SDEEGKESWL EIITSLSWEA ANLLKPDMSK SGGMDPGGYV KVKCLASGFR HDSMVVKGVV CKKNVVNRRM STKIEKARLL ILGGGLEYQR VSNQLSSFDT
0501: LLQQEKDHLK MAVAKIHAER PNILLVEKSV SRFAQEYLLA KDISLVLNIK RPLLDRIARC TGAQIIPSVD HLSSQKLGYC ENFRVDRYPE EHGSTGQVGK
0601: KVVKTLMYFE HCPKPLGFTI LLRGANEDEL KKVKHVVQYG VFAAYHLALE TSFLADEGAS PELPLNSPIT VALPDKSTSI ERSISTVPGF TVSTYEKSPT
0701: MLSCAEPQRA NSVPVSELLS TTTNLSIQKD IPPIPYGSGW QAREINPSFV FSRHNISLNL PDRVIESRNS DLSGRSVPVD TPADKSNPIV VADETTNNSL
0801: HLSGQGFVRK SSQIGTSIMV ENQDNGSELT IAQQQNNEKP KETQSQKEEF PPSPSDHQSI LVSLSSRSVW KGTVCERSHL FRIKYYGSFD KPLGRFLRDH
0901: LFDQSYRCRS CEMPSEAHVH CYTHRQGSLT ISVKKLQDYL LPGEKEGKIW MWHRCLRCPR LNGFPPATLR VVMSDAAWGL SFGKFLELSF SNHAAASRVA
1001: CCGHSLHRDC LRFYGFGNMV ACFRYATIDV HSVYLPPSIL SFNYENQDWI QRETDEVIER AELLFSEVLN AISQIAEKGF RRRIGELEEV LQKEKAEFEE
1101: NMQKILHREV NEGQPLVDIL ELYRIHRQLL FQSYMWDHRL INASTLHKLE NSDDTKREEN EKPPLAKSQT LPEMNAGTNS LLTGSEVNLN PDGDSTGDTG
1201: SLNNVQKEAD TNSDLYQEKD DGGEVSPSKT LPDTSYPLEN KVDVRRTQSD GQIVMKNLSA TLDAAWIGER QTSVEIPTNN KVSLPPSTMS NSSTFPPISE
1301: GLMPIDLPEQ QNEFKVAYPV SPALPSKNYE NSEDSVSWLS VPFLNFYRSI NKNFLLSSQK LDTFGEHSPI YISSFREAEL QGGPRLLLPV GLNDIVVPVY
1401: DDEPTSMIAY ALMSPEYQRQ TSAEGESLVS YPSELNIPRP VDDTIFDPSR SNGSVDESIL SISSSRSTSL LDPLSYTKAL HARVSYGEDG TLGKVKYTVT
1501: CYYAKRFEAL RGICLPSELE YIRSLSRCKK WGAQGGKSNV FFAKTLDDRF IIKQVTKTEL ESFIKFAPAY FKYLSESIST KSPTCLAKIL GIYQVATKQL
1601: KSGKETKMDV LIMENLLFGR TVKRLYDLKG SSRARYNPDS SGSNKVLLDQ NLIEAMPTSP IFVGNKAKRL LERAVWNDTA FLALGDVMDY SLLVGVDEEK
1701: NELVLGIIDF LRQYTWDKHL ESWVKFTGIL GGPKNEAPTV ISPKQYKRRF RKAMTTYFLM VPDQWSPPNV VANNSKSDQP EETSQAGTQA E
Arabidopsis Description
FAB1B1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.