Factsheet for HORVU2Hr1G037770.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G091030.9
HORVU6Hr1G060230.12

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20110.1	HORVU2Hr1G091030.9	AT4G21670.1	18541146
AT1G20110.1	HORVU6Hr1G060230.12	AT4G21670.1	18541146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G184400.2	Wheat	cytosol	96.81	96.81
TraesCS2D01G203300.1	Wheat	cytosol	91.83	91.83
TraesCS2B01G223000.1	Wheat	cytosol	85.06	85.06
Os07t0573300-01	Rice	cytosol	80.08	77.76
EER97421	Sorghum	cytosol	69.92	65.73
Zm00001d021878_P003	Maize	cytosol	69.72	64.58
CDY29372	Canola	cytosol	25.1	62.38
Bra025793.1-P	Field mustard	cytosol	24.5	61.19
GSMUA_Achr1P27620_001	Banana	cytosol	16.14	60.9
GSMUA_Achr1P27590_001	Banana	cytosol, nucleus, plastid	18.33	59.35
KRH05975	Soybean	cytosol	38.65	59.33
GSMUA_Achr1P27690_001	Banana	mitochondrion	23.51	58.71
CDY44204	Canola	cytosol	41.24	53.08
GSMUA_Achr8P33940_001	Banana	cytosol	52.99	51.06
KRH61022	Soybean	nucleus	51.2	48.95
CDY62935	Canola	cytosol	52.79	47.92
CDY54337	Canola	cytosol	52.99	47.76
Bra016476.1-P	Field mustard	cytosol	52.59	47.74
KRH51684	Soybean	cytosol	50.6	46.35
KRH17455	Soybean	extracellular	14.54	45.34
AT1G20110.1	Thale cress	cytosol	53.59	44.76
VIT_18s0001g14750.t01	Wine grape	cytosol	51.59	44.27
PGSC0003DMT400025563	Potato	cytosol	48.61	43.34
Solyc04g081750.2.1	Tomato	cytosol	48.21	42.98
KRH45071	Soybean	cytosol, nucleus, plastid	6.37	42.11
GSMUA_Achr1P26420_001	Banana	cytosol	40.44	40.12
CDY43412	Canola	nucleus	34.06	31.2
CDY37424	Canola	extracellular	16.93	29.93

Protein Annotations

MapMan:22.5.4.3.7	Gene3D:3.30.40.10	UniProt:A0A287HQS2	GO:GO:0000813	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003729	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0031902	GO:GO:0036258	GO:GO:0043130	GO:GO:0046872
GO:GO:0055072	GO:GO:0070676	EnsemblPlantsGene:HORVU2Hr1G037770	EnsemblPlants:HORVU2Hr1G037770.2	InterPro:IPR013083	InterPro:IPR017455
PFAM:PF01363	PFscan:PS50178	PANTHER:PTHR22835	PANTHER:PTHR22835:SF473	SMART:SM00064	SUPFAM:SSF57903
UniParc:UPI000B4785E3	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

No Description!

Coordinates

chrchr2H:-:174488224..174499888

Molecular Weight (calculated)

53635.1 Da

IEP (calculated)

6.193

GRAVY (calculated)

-0.618

Length

502 amino acids

Sequence
(BLAST)

001: MQHGSGDYAS PAPAGHYYPH QYTSPGPTPH PIAADPPIPG GYASAPPYSV GGYPEQPPSA PSYTQPPQYA GYPPYNPTPY PPEPTPAPYY SYSQPTQPAP
101: AAEPSPAPLP YDAPYYGGGY QQPAARYGDD DYLNEGAYAY TGDAGPEPYG ARGTAPTRSG AAMFDDYGRS IGLSSGGVEQ PHGGEGGSVG GSFGKIARAV
201: PKAETHEDAS GGAQKFRVKL LPEGAGSPTD VLCQVGLDGI RMLDPSTSRT LRIYPLDTLT KWEVLDSTVF AIWAKTSVDF EAKRIRLKSN SYTSNTLLDT
301: VTAATVQFKE IGEDARAKGT VDAGKSSLQS NEKKKGFDWM FAKPVDEVKD HWVPDEAAKK CQSCAGDFSH FNRRHHCRNC GEIFCDKCSQ GRIALTAEDN
401: APLVRVCDRC MAEVSQRLSM AQEAANRSTT VQSHGDLARK LKEELERNRK SSGTASGGAS GTRMREVACP TCTVHLQVEV PTSGSETVEC GVCQHAFLVS
501: AN

Best Arabidopsis Sequence Match ( AT1G20110.1 )
(BLAST)

001: MQQGDYNSYY HHQYSQFQNP TPNPNPNPNP SPPAPATVAG PTDLTRNTYA SAPPFTGGYG SADYSNYSQN YTPYGQNSEH VPPSAPSFTS PSQPPPSPPA
101: TSLNPNSYST FNQPPPPPTI HPQPLSSYGS FDSTAPYQQP TSQHMYYSPY DQHQTSGYSS APPPSSAPAP NPNPAPYSSS LYSAPPYSSG GSSIPPSYEK
201: PSVKFDQSGY DGYNRSRSDL GSDLYGKRSD SGEYPAFEDS YGDGVYAYQG GKVEPYGSRG TAPKSSNSTL FDDYGRSISF SSSGRDSSVS SNSAKIVRAV
301: PKADVQEDST GGVQKFRVKL LAETYGQTTT DVLCQIGLDG LRMLDPSTSR TLRIYPLENI TRCEKLDSSI LAFWSKTPVD IEAKRIRLQS NSYTTNTLLD
401: TVTAAMFQAK EIGGSSRPPT SGKLIEQTAE KKKGLGDWMN IIKPVNEEKD HWVPDEAVSK CTSCGSDFGA FIRRHHCRNC GDVFCDKCTQ GRIALTAEDN
501: APQVRVCDRC MAEVSQRLSN AKETTGRNVS LQSHEDLARK LQEEMERNRK SSSGLREGSG RRMKEVACPT CTVHLQVQVP VSGSETIECG VCQNPFLVSA
601: H

Arabidopsis Description

FREE1Protein FREE1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.