Factsheet for Os07t0573300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0639000-01
Os04t0529500-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20110.1	Os02t0639000-01	AT4G21670.1	18541146
AT1G20110.1	Os04t0529500-02	AT4G21670.1	18541146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G184400.2	Wheat	cytosol	77.76	80.08
HORVU2Hr1G037770.2	Barley	cytosol	77.76	80.08
TraesCS2D01G203300.1	Wheat	cytosol	75.44	77.69
TraesCS2B01G223000.1	Wheat	cytosol	75.05	77.29
EER97421	Sorghum	cytosol	68.86	66.67
Zm00001d021878_P003	Maize	cytosol	69.05	65.87
CDY29372	Canola	cytosol	25.53	65.35
Bra025793.1-P	Field mustard	cytosol	24.95	64.18
KRH05975	Soybean	cytosol	38.68	61.16
GSMUA_Achr1P27620_001	Banana	cytosol	15.67	60.9
GSMUA_Achr1P27690_001	Banana	mitochondrion	22.82	58.71
GSMUA_Achr1P27590_001	Banana	cytosol, nucleus, plastid	17.41	58.06
Os06t0724100-01	Rice	cytosol	53.97	57.17
CDY44204	Canola	cytosol	41.01	54.36
GSMUA_Achr8P33940_001	Banana	cytosol	53.19	52.78
CDY54337	Canola	cytosol	53.97	50.09
CDY62935	Canola	cytosol	53.19	49.73
Bra016476.1-P	Field mustard	cytosol	53.0	49.55
KRH61022	Soybean	nucleus	49.9	49.14
KRH17455	Soybean	extracellular	14.89	47.83
KRH51684	Soybean	cytosol	50.48	47.63
AT1G20110.1	Thale cress	cytosol	53.0	45.59
VIT_18s0001g14750.t01	Wine grape	cytosol	51.45	45.47
PGSC0003DMT400025563	Potato	cytosol	49.32	45.29
Solyc04g081750.2.1	Tomato	cytosol	48.55	44.58
GSMUA_Achr1P26420_001	Banana	cytosol	41.59	42.49
KRH45071	Soybean	cytosol, nucleus, plastid	6.19	42.11
CDY43412	Canola	nucleus	35.78	33.76
CDY37424	Canola	extracellular	16.83	30.63
Os03t0669800-01	Rice	plasma membrane	9.28	5.15

Protein Annotations

MapMan:22.5.4.3.7	Gene3D:3.30.40.10	EntrezGene:4343683	ProteinID:BAC83151.1	ProteinID:BAT02258.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR013083	InterPro:IPR017455	EnsemblPlantsGene:Os07g0573300
EnsemblPlants:Os07t0573300-01	PFAM:PF01363	PRINTS:PR01217	PFscan:PS50178	PANTHER:PTHR22835	PANTHER:PTHR22835:SF473
UniProt:Q6ZL20	SMART:SM00064	SUPFAM:SSF50729	SUPFAM:SSF57903	UniParc:UPI00001BF215	RefSeq:XP_015644733.1
InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate 5-kinase) (PIP5K) (PtdIns(4)P-5- kinase) (PIKfyve) (p235). Splice isoform p235S. (Os07t0573300-01);Similar to FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate 5-kinase) (PIP5K) (PtdIns(4)P-5- kinase) (PIKfyve) (p235). (Os07t0573300-02)

Coordinates

chr7:+:23169765..23173649

Molecular Weight (calculated)

54853.3 Da

IEP (calculated)

6.372

GRAVY (calculated)

-0.605

Length

517 amino acids

Sequence
(BLAST)

001: MQHGDYASSA PPAAGHYYPH QFAPNPPPHP ASSAADAAPP TIPASYASAP PYSVGGYSDQ PPSAPSYAPP PQYAGYAPPY NNPNPAPYPP ESSPAPAPYY
101: SYPPTAAGVA TQHAPAAEPS PAPLPYDAPY YGGYQPPPTA GYGDDDYLNE GAYAYSGDGG SEPYGARGTA PTRSGAAMFD DYGRSIGPSS GGADQWPTGG
201: GGGVGGSFGK IARAVPKAES HEDANGGAQK FRVKLLPEGA GSPTDVLCQI GLDGIRMLDP STSRTLRIYP LDTLTRWDVL DSTVFAFWAK TPVDFEAKRI
301: RLKSNSYTSN TLLDTVTAAT VQFKEIGGDA RGRGTVDSSK PMSQSNEKKK GFDWMFAKPV DEVKDHWVPD EAAKKCYSCA VDFSPFNRRH HCRNCGEIFC
401: DKCSQGRTAL TAEDNAPLVR VCDRCMAEVS QRLSIAQEAA NRSATVQSHE DLARKLKEEM ERNRKSSGSA SGGSSGTRMR EVACPTCTVH LQVQVPTSGS
501: ETVECGVCQH AFRVSAN

Best Arabidopsis Sequence Match ( AT1G20110.1 )
(BLAST)

001: MQQGDYNSYY HHQYSQFQNP TPNPNPNPNP SPPAPATVAG PTDLTRNTYA SAPPFTGGYG SADYSNYSQN YTPYGQNSEH VPPSAPSFTS PSQPPPSPPA
101: TSLNPNSYST FNQPPPPPTI HPQPLSSYGS FDSTAPYQQP TSQHMYYSPY DQHQTSGYSS APPPSSAPAP NPNPAPYSSS LYSAPPYSSG GSSIPPSYEK
201: PSVKFDQSGY DGYNRSRSDL GSDLYGKRSD SGEYPAFEDS YGDGVYAYQG GKVEPYGSRG TAPKSSNSTL FDDYGRSISF SSSGRDSSVS SNSAKIVRAV
301: PKADVQEDST GGVQKFRVKL LAETYGQTTT DVLCQIGLDG LRMLDPSTSR TLRIYPLENI TRCEKLDSSI LAFWSKTPVD IEAKRIRLQS NSYTTNTLLD
401: TVTAAMFQAK EIGGSSRPPT SGKLIEQTAE KKKGLGDWMN IIKPVNEEKD HWVPDEAVSK CTSCGSDFGA FIRRHHCRNC GDVFCDKCTQ GRIALTAEDN
501: APQVRVCDRC MAEVSQRLSN AKETTGRNVS LQSHEDLARK LQEEMERNRK SSSGLREGSG RRMKEVACPT CTVHLQVQVP VSGSETIECG VCQNPFLVSA
601: H

Arabidopsis Description

FREE1Protein FREE1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.