Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P04860_001 | Banana | cytosol | 46.25 | 46.25 |
| GSMUA_Achr4P05110_001 | Banana | cytosol | 46.25 | 45.96 |
| GSMUA_Achr10P... | Banana | cytosol | 45.62 | 45.91 |
| GSMUA_Achr9P24070_001 | Banana | cytosol | 45.62 | 45.34 |
| GSMUA_Achr8P13060_001 | Banana | cytosol | 46.88 | 44.64 |
| GSMUA_Achr11P... | Banana | cytosol | 43.12 | 43.95 |
| CDY45767 | Canola | cytosol | 41.88 | 43.51 |
| GSMUA_Achr4P25740_001 | Banana | cytosol | 34.38 | 37.16 |
| GSMUA_Achr8P33930_001 | Banana | cytosol | 46.25 | 35.07 |
| GSMUA_Achr4P25750_001 | Banana | cytosol | 37.5 | 33.9 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr3G26800_001 | EnsemblPlants:GSMUA_Achr3P26800_001 | EnsemblPlants:GSMUA_Achr3T26800_001 | UniProt:M0SI46 |
| PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF89 | InterPro:SKP1 |
| InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 | SUPFAM:SSF81382 |
| InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI00029633A4 | : | : | : |
Description
Putative SKP1-like protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr3G26800_001]
Coordinates
chr3:-:26508809..26510046
Molecular Weight (calculated)
18059.3 Da
IEP (calculated)
4.238
GRAVY (calculated)
-0.218
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGDNGRKI VKLRSSDGIL FEVDEGVARQ YSQSIGNLIE DDCATGVIPI FNVTCRILRM LLEYMENHAN ATNNGVFGGP GPVLAHRLKK RDAEFINVDN
101: DTLFDLLEAA DYFNVSSILE LIVKTIAEAP EEIRDTFDIV CDNTPEEEEE VRRQYFWAFH
101: DTLFDLLEAA DYFNVSSILE LIVKTIAEAP EEIRDTFDIV CDNTPEEEEE VRRQYFWAFH
001: MAETKKMIIL KSSDGESFEV EEAVAVESQT IKHMIEDDCV DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS TENHELKTWD NDFVKVDHPT
101: LFDLLRAANY LNISGLLDLT CKAVADQMRG KTPAQMREHF NIKNDYTPEE EAEVRNENRW AFE
101: LFDLLRAANY LNISGLLDLT CKAVADQMRG KTPAQMREHF NIKNDYTPEE EAEVRNENRW AFE
Arabidopsis Description
ASK3SKP1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL93]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.