Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68112 | Canola | cytosol | 57.14 | 58.28 |
| CDX85931 | Canola | cytosol | 57.14 | 58.28 |
| CDX87650 | Canola | cytosol | 58.44 | 55.9 |
| CDY39073 | Canola | cytosol | 57.79 | 55.62 |
| CDY13521 | Canola | cytosol | 57.79 | 55.62 |
| CDX73212 | Canola | cytosol | 57.79 | 55.28 |
| CDY40610 | Canola | cytosol | 53.9 | 53.21 |
| CDX89042 | Canola | cytosol | 54.55 | 52.83 |
| CDY40611 | Canola | cytosol | 51.3 | 52.67 |
| CDX93698 | Canola | cytosol | 52.6 | 51.92 |
| CDY69121 | Canola | cytosol | 44.16 | 51.91 |
| CDY44209 | Canola | cytosol | 53.25 | 50.93 |
| CDX93699 | Canola | cytosol | 52.6 | 50.62 |
| CDX77280 | Canola | cytosol | 51.3 | 49.69 |
| CDX80590 | Canola | cytosol | 50.65 | 48.45 |
| CDY29370 | Canola | cytosol | 50.65 | 48.45 |
| CDY16470 | Canola | cytosol | 48.7 | 47.17 |
| CDY43408 | Canola | cytosol | 44.16 | 44.74 |
| CDY63159 | Canola | cytosol | 46.75 | 44.72 |
| CDY67544 | Canola | cytosol | 46.75 | 44.72 |
| CDY03015 | Canola | cytosol | 43.51 | 44.37 |
| CDY01389 | Canola | cytosol | 46.1 | 44.1 |
| CDY68971 | Canola | cytosol | 43.51 | 44.08 |
| CDY14922 | Canola | cytosol | 48.05 | 44.05 |
| CDY17409 | Canola | cytosol | 45.45 | 44.03 |
| CDY04140 | Canola | cytosol | 44.16 | 42.77 |
| GSMUA_Achr3P26800_001 | Banana | cytosol | 43.51 | 41.88 |
| CDX96963 | Canola | cytosol | 48.05 | 39.15 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | GO:A0A078I6L0 | UniProt:A0A078I6L0 | EnsemblPlants:CDY45767 | ProteinID:CDY45767 |
| ProteinID:CDY45767.1 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00082690001 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PANTHER:PTHR11165 |
| PANTHER:PTHR11165:SF89 | InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 |
| SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniPathway:UPA00143 | UniParc:UPI0004EE6516 |
Description
BnaC04g22530DBnaC04g22530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6L0]
Coordinates
chrLK032636:+:1803..2267
Molecular Weight (calculated)
17438.5 Da
IEP (calculated)
4.478
GRAVY (calculated)
-0.390
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTKKILFKS SDGHLFEADE AVARQSTTIS HPLEDCCAKA DDEFLLPNVS GNILSLVIEY CKKHADVGSI SEEDLKKWDA EFVLGMDQPT FFDLIRASNY
101: QNIPSLIALT CQTIANMIAD PNEIRATFEI KNDFTPEEEE KGRQENRWAF HLSH
101: QNIPSLIALT CQTIANMIAD PNEIRATFEI KNDFTPEEEE KGRQENRWAF HLSH
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Arabidopsis Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.